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  • François Allal

Articles dans une revue

2024
Frédéric Clota, Alexander Goikoetxea, Alain Vergnet, Marie-Odile Blanc, Stéphane Lallement, et al.. Post-larval exposure to warm temperature enhances female ratio, while starvation and photoperiod do not: The case of European seabass, Dicentrarchus labrax. Aquaculture, 2024, 586, pp.740758. doi:10.1016/j.aquaculture.2024.740758. https://hal.inrae.fr/hal-04517161

2024
F. Moroni, M. Carvalho, A. R. Di Rosa, S. Torrecillas, R. Fontanillas, et al.. Genetic selection and novel feeds containing single cell protein as a substitute for fishmeal in European sea bass: Effects on growth, fatty acid profile and E-sensing analysis of fillets. Aquaculture Reports, 2024, 35, pp.102021. doi:10.1016/j.aqrep.2024.102021. https://hal.umontpellier.fr/hal-04531681

2023
Simona Rimoldi, Daniel Montero, Silvia Torrecillas, Antonio Serradell, Felix Acosta, et al.. Genetically superior European sea bass (Dicentrarchus labrax) and nutritional innovations: Effects of functional feeds on fish immune response, disease resistance, and gut microbiota. Aquaculture Reports, 2023, 33, pp.101747. doi:10.1016/j.aqrep.2023.101747. https://hal.science/hal-04224778

2023
S. Torrecillas, S. Rimoldi, D. Montero, A. Serradell, F. Acosta, et al.. Genotype x nutrition interactions in European sea bass (Dicentrarchus labrax): Effects on gut health and intestinal microbiota. Aquaculture, 2023, 574, pp.739639. doi:10.1016/j.aquaculture.2023.739639. https://hal.umontpellier.fr/hal-04094082

2023
Antoine Jourdan, Romain Morvezen, Florian Enez, Pierrick Haffray, Adeline Lange, et al.. Potential of genomic selection for growth, meat content and colour traits in mixed-family breeding designs for the Pacific oyster Crassostrea gigas. Aquaculture, 2023, 576, pp.739878. doi:10.1016/j.aquaculture.2023.739878. https://hal.science/hal-04158060

2023
D. Montero, M. Carvalho, G. Terova, R. Fontanillas, A. Serradell, et al.. Nutritional innovations in superior European sea bass (Dicentrarchus labrax) genotypes: Implications on fish performance and feed utilization. Aquaculture, 2023, 572, pp.739486. doi:10.1016/j.aquaculture.2023.739486. https://hal.umontpellier.fr/hal-04094069

2023
Antonio Serradell, Daniel Montero, Genciana Terova, Simona Rimoldi, Alex Makol, et al.. Functional Additives in a Selected European Sea Bass (Dicentrarchus labrax) Genotype: Effects on the Stress Response and Gill Antioxidant Response to Hydrogen Peroxide (H2O2) Treatment. Animals, 2023, 13 (14), 2265 (20p.). doi:10.3390/ani13142265. https://hal.science/hal-04204113

2023
Julie Nati, Felipe Blasco, Charles Rodde, Alain Vergnet, François Allal, et al.. In a marine teleost, the significance of oxygen supply for acute thermal tolerance depends upon the context and the endpoint used. Journal of Experimental Biology, 2023, 226 (11), pp.jeb245210. doi:10.1242/jeb.245210. https://hal.umontpellier.fr/hal-04100080

2023
Emilie Delpuech, Marc Vandeputte, Romain Morvezen, Anastasia Bestin, Mathieu Besson, et al.. Whole‐genome sequencing identifies interferon-induced protein IFI6/IFI27-like as a strong candidate gene for VNN resistance in European sea bass. Genetics Selection Evolution, 2023, 55, pp.30. doi:10.1186/s12711-023-00805-2. https://hal.inrae.fr/hal-04116035

2023
Josep Calduch-Giner, Enrique Rosell-Moll, Mathieu Besson, Alain Vergnet, Jean-Sébastien Bruant, et al.. Changes in transcriptomic and behavioural traits in activity and ventilation rates associated with divergent individual feed efficiency in gilthead sea bream (Sparus aurata). Aquaculture Reports, 2023, 29, pp.101476. doi:10.1016/j.aqrep.2023.101476. https://hal.umontpellier.fr/hal-03948385

2022
Alexander Goikoetxea, Arianna Servili, Camille Houdelet, Olivier Mouchel, Sophie Hermet, et al.. Natural cortisol production is not linked to the sexual fate of European sea bass. Fish Physiology and Biochemistry, 2022, 48 (4), pp.1117-1135. doi:10.1007/s10695-022-01104-1. https://hal.umontpellier.fr/hal-03773801

2022
Mathieu Besson, Nicky Rombout, Germain Salou, Alain Vergnet, Sophie Cariou, et al.. Potential for genomic selection on feed efficiency in gilthead sea bream (Sparus aurata), based on individual feed conversion ratio, carcass and lipid traits. Aquaculture Reports, 2022, 24, doi:10.1016/j.aqrep.2022.101132. https://hal.umontpellier.fr/hal-03679214

2021
Benjamin Geffroy, Mathieu Besson, Núria Sánchez-Baizán, Frederic Clota, Alexander Goikoetxea, et al.. Unraveling the genotype by environment interaction in a thermosensitive fish with a polygenic sex determination system. Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (50), pp.e2112660118. doi:10.1073/pnas.2112660118. https://hal.inrae.fr/hal-03485506

2021
Benjamin Geffroy, Manuel Gesto, Frédéric Clota, Johan Aerts, Maria J. Darias, et al.. Parental selection for growth and early-life low stocking density increase the female-to-male ratio in European sea bass. Scientific Reports, 2021, 11 (1), doi:10.1038/s41598-021-93116-9. https://hal.inrae.fr/hal-03360565

2021
Ronan Griot, François Allal, Florence Phocas, Sophie Brard-Fudulea, Romain Morvezen, et al.. Optimization of Genomic Selection to Improve Disease Resistance in Two Marine Fishes, the European Sea Bass (Dicentrarchus labrax) and the Gilthead Sea Bream (Sparus aurata). Frontiers in Genetics, 2021, 12, pp.665920. doi:10.3389/fgene.2021.665920. https://hal.inrae.fr/hal-03360561

2021
Charles Rodde, Hugues de Verdal, Marc Vandeputte, François Allal, Julie Nati, et al.. An investigation of links between metabolic rate and feed efficiency in European sea bass Dicentrarchus labrax. Journal of Animal Science, 2021, 99 (6), pp.1-9. doi:10.1093/jas/skab152. https://hal.inrae.fr/hal-03360566

2021
Sara Faggion, Marc Vandeputte, Alain Vergnet, Frédéric Clota, Marie-Odile Blanc, et al.. Sex dimorphism in European sea bass (Dicentrarchus labrax L.): New insights into sex-related growth patterns during very early life stages. PLoS ONE, 2021, 16 (4), pp.e0239791. doi:10.1371/journal.pone.0239791. https://hal.inrae.fr/hal-03206637

2021
Sofie Barsøe, François Allal, Alain Vergnet, Marc Vandeputte, Niels Jørgen Olesen, et al.. Different survival of three populations of European sea bass (Dicentrarchus labrax) following challenge with two variants of nervous necrosis virus (NNV). Aquaculture Reports, 2021, 19, pp.100621. doi:10.1016/j.aqrep.2021.100621. https://hal.inrae.fr/hal-03150815

2021
C. Peñaloza, T. Manousaki, R. Franch, A. Tsakogiannis, A. K. Sonesson, et al.. Development and testing of a combined species SNP array for the European seabass (Dicentrarchus labrax) and gilthead seabream (Sparus aurata). Genomics, 2021, 113 (4), pp.2096--2107. doi:10.1016/j.ygeno.2021.04.038. https://hal.umontpellier.fr/hal-03415631

2021
Pierre Boudry, François Allal, Muhammad L. Aslam, Luca Bargelloni, Tim P. Bean, et al.. Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries. Aquaculture Reports, 2021, 20, pp.100700. doi:10.1016/j.aqrep.2021.100700. https://hal.umontpellier.fr/hal-03411084

2021
Sarah Allal, Valentin Rabuel, Charline Gengler, Catherine Douchet, Francois Allal, et al.. Case report of osteomyelitis of the mandible in osteopetrosis and management considerations. International Journal of Surgery Case Reports, 2021, 81, pp.105813. doi:10.1016/j.ijscr.2021.105813. https://hal.umontpellier.fr/hal-03404273

2021
Ronan Griot, François Allal, Florence Phocas, Sophie Brard-Fudulea, Romain Morvezen, et al.. Genome-wide association studies for resistance to viral nervous necrosis in three populations of European sea bass (Dicentrarchus labrax) using a novel 57k SNP array DlabChip. Aquaculture, 2021, 530, pp.735930. doi:10.1016/j.aquaculture.2020.735930. https://hal.inrae.fr/hal-03544239

2020
Charles Rodde, Hugues de Verdal, Sébastien Lefebvre, Christophe Menniti, Marc Vandeputte, et al.. Variations in isotope incorporation rates and trophic discrimination factors of carbon and nitrogen stable isotopes in scales from three European sea bass (Dicentrarchus labrax) populations. Journal of Experimental Marine Biology and Ecology, 2020, 533, pp.151468. doi:10.1016/j.jembe.2020.151468. https://hal.science/hal-03097301

2020
Charles Rodde, Marc Vandeputte, François Allal, Mathieu Besson, Frédéric Clota, et al.. Population, Temperature and Feeding Rate Effects on Individual Feed Efficiency in European Sea Bass (Dicentrarchus labrax). Frontiers in Marine Science, 2020, 7, doi:10.3389/fmars.2020.578976. https://hal.inrae.fr/hal-03150873

2020
Maud Duranton, François Allal, Sophie Valière, Olivier Bouchez, François Bonhomme, et al.. The contribution of ancient admixture to reproductive isolation between European sea bass lineages. Evolution Letters, 2020, 4 (3), pp.226-242. doi:10.1002/evl3.169. https://hal.science/hal-03065745

2020
Sara Faggion, Pierre Sanchez, Marc Vandeputte, Frédéric Clota, Alain Vergnet, et al.. Evaluation of a European sea bass (Dicentrarchus labrax L.) post-larval tagging method with ultra-small RFID tags. Aquaculture, 2020, 520, pp.734945. doi:10.1016/j.aquaculture.2020.734945. https://hal.inrae.fr/hal-03150884

2020
Marc Vandeputte, Clémence Fraslin, Pierrick Haffray, Anastasia Bestin, François Allal, et al.. How to genetically increase fillet yield in fish: Relevant genetic parameters and methods to predict genetic gain. Aquaculture, 2020, 519, pp.734877. doi:10.1016/j.aquaculture.2019.734877. https://hal.inrae.fr/hal-03150887

2020
Chloe Dambrine, Martin Huret, Mathieu Woillez, Laure Pecquerie, Francois Allal, et al.. Contribution of a bioenergetics model to investigate the growth and survival of European seabass in the Bay of Biscay - English Channel area. Ecological Modelling, 2020, 423, pp.109007. doi:10.1016/j.ecolmodel.2020.109007. https://hal.science/hal-02921206

2019
Sara Faggion, Marc Vandeputte, Béatrice Chatain, Pierre-Alexandre Gagnaire, François Allal. Population-specific variations of the genetic architecture of sex determination in wild European sea bass Dicentrarchus labrax L.. Heredity, 2019, 122 (5), pp.612-621. doi:10.1038/s41437-018-0157-z. https://hal.science/hal-02395931

2019
Marc Vandeputte, P.-A. Gagnaire, F. Allal. The European sea bass: a key marine fish model in the wild and in aquaculture. Animal Genetics, 2019, 50 (3), pp.195-206. doi:10.1111/age.12779. https://hal.science/hal-02395941

2019
Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Jean-Michel Allamellou, et al.. First evidence of realized selection response on fillet yield in Rainbow trout Oncorhynchus mykiss, Using Sib selection or based on correlated ultrasound measurements. Frontiers in Genetics, 2019, 10, pp.1-13. doi:10.3389/fgene.2019.01225. https://hal.inrae.fr/hal-02627462

2019
Ronan Griot, Francois Allal, Sophie Brard-Fudulea, Romain Morvezen, Pierrick Haffray, et al.. APIS: An auto-adaptive parentage inference software that tolerates missing parents. Molecular Ecology Resources, 2019, pp.1-12. doi:10.1111/1755-0998.13103. https://hal.science/hal-02434174

2019
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Combining Individual Phenotypes of Feed Intake With Genomic Data to Improve Feed Efficiency in Sea Bass. Frontiers in Genetics, 2019, 10, pp.1-14. doi:10.3389/fgene.2019.00219. https://hal.science/hal-02403255

2018
Maud Duranton, François Allal, Christelle Fraïsse, Nicolas Bierne, François Bonhomme, et al.. The origin and remolding of genomic islands of differentiation in the European sea bass. Nature Communications, 2018, 9 (1), doi:10.1038/s41467-018-04963-6. https://hal.umontpellier.fr/hal-01825457

2018
Christos Palaiokostas, Sophie Cariou, Anastasia Bestin, Jean-Sebastien Bruant, Pierrick Haffray, et al.. Genome-wide association and genomic prediction of resistance to viral nervous necrosis in European sea bass (Dicentrarchus labrax) using RAD sequencing. Genetics Selection Evolution, 2018, 50 (1), pp.1-11. doi:10.1186/s12711-018-0401-2. https://hal.science/hal-01826622

2018
Dafni Anastasiadi, Marc Vandeputte, Nuria Sanchez-Baizan, Francois Allal, Francesc Piferrer. Dynamic epimarks in sex-related genes predict gonad phenotype in the European sea bass, a fish with mixed genetic and environmental sex determination. Epigenetics, 2018, 13 (9), pp.988-1011. doi:10.1080/15592294.2018.1529504. https://hal.science/hal-01994184

2017
Marc Vandeputte, Antonio Puledda, Anne Sophie Tyran, Anastasia Bestin, Céline Coulombet, et al.. Investigation of morphological predictors of fillet and carcass yield in European sea bass (Dicentrarchus labrax) for application in selective breeding. Aquaculture, 2017, 470, pp.40-49. doi:10.1016/j.aquaculture.2016.12.014. https://hal.science/hal-01595276

2017
J.E.J. Hillen, I. Coscia, Marc Vandeputte, K. Herten, B. Hellemans, et al.. Estimates of genetic variability and inbreeding in experimentally selected populations of European sea bass. Aquaculture, 2017, 479, pp.742-749. doi:10.1016/j.aquaculture.2017.07.012. https://hal.science/hal-01583182

2017
Q.K. Doan, Marc Vandeputte, B. Chatain, Thierry Morin, F. Allal. Viral encephalopathy and retinopathy in aquaculture: a review. Journal of Fish Diseases, 2017, 40 (5), pp.717-742. doi:10.1111/jfd.12541. https://hal.science/hal-01533903

2017
Hugues de Verdal, Hans Komen, Edwige Quillet, Béatrice Chatain, François Allal, et al.. Improving feed efficiency in fish using selective breeding: a review. Reviews in Aquaculture, 2017, 10 (4), pp.1-19. doi:10.1111/raq.12202. https://hal.science/hal-01602277

2016
Jean-Noël Hubert, François Allal, Caroline Hervet, Monique Ravakarivelo, Zsigmond Jeney, et al.. How could fully scaled carps appear in natural waters in Madagascar?. Proceedings of the Royal Society B: Biological Sciences, 2016, 283 (1837), pp.1-8. doi:10.1098/rspb.2016.0945. https://hal.umontpellier.fr/hal-01924181

2016
Sebastien Ferrari, Khaled Horri, François Allal, Alain Vergnet, David Benhaim, et al.. Heritability of boldness and hypoxia avoidance in European seabass, Dicentrarchus labrax. PLoS ONE, 2016, 11 (12), pp.1-16. doi:10.1371/journal.pone.0168506. https://hal.science/hal-01602254

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