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  • Régis Hocdé

Articles dans une revue

Romain Le Gendre, David Varillon, Sylvie Fiat, Régis Hocdé, Antoine de Ramon N'Yeurt, et al.. ReefTEMPS: The Pacific Islands Coastal Temperature Network. Earth System Science Data (ESSD), In press, https://ird.hal.science/ird-04923923v1

2024
Romane Rozanski, Laure Velez, Régis Hocdé, Agnès Duhamet, Conor Waldock, et al.. Seasonal dynamics of Mediterranean fish communities revealed by eDNA: Contrasting compositions across depths and Marine Fully Protected Area boundaries. Ecological Indicators, 2024, 166, pp.112290. https://hal.science/hal-04645476v1

2024
Anaïs Beauvieux, Bastien Mérigot, Jérémy Le Luyer, Jean-Marc Fromentin, Nathan Couffin, et al.. Mesophotic zone as refuge: acclimation and in-depth proteomic response of yellow gorgonians in the Mediterranean sea. Coral Reefs, 2024, 43 (2), pp.415-428. https://hal.umontpellier.fr/hal-04664112v1

2023
Laetitia Mathon, Virginie Marques, Stéphanie Manel, Camille Albouy, Marco Andrello, et al.. The distribution of coastal fish eDNA sequences in the Anthropocene. Global Ecology and Biogeography, 2023, https://hal.umontpellier.fr/hal-04146566v1

2023
Indra Bayu Vimono, Philippe Borsa, Régis Hocdé, Laurent Pouyaud. Phylogeography of long-spined sea urchin Diadema setosum across the Indo-Malay archipelago. Zoological Studies, 2023, 62, pp.39. https://hal.science/hal-04223904v1

2023
Marion Muff, Mélissa Jaquier, Virginie Marques, Laurent Ballesta, Julie Deter, et al.. Environmental DNA highlights fish biodiversity in mesophotic ecosystems. Environmental DNA, 2023, 5 (1), pp.56-72. https://hal.science/hal-04118681v1

2022
Jean‐baptiste Juhel, Virginie Marques, Rizkie Satriya Utama, Indra Bayu Vimono, Hagi Yulia Sugeha, et al.. Estimating the extended and hidden species diversity from environmental DNA in hyper‐diverse regions. Ecography, 2022, 2022 (10), pp.e06299. https://hal.umontpellier.fr/hal-03823160v1

2022
Bastien Macé, Régis Hocdé, Virginie Marques, Pierre-Edouard Guerin, Alice Valentini, et al.. Evaluating bioinformatics pipelines for population-level inference using environmental DNA. Environmental DNA, 2022, 4 (3), pp.674-686. https://hal.science/hal-04395283v1

2022
Laëtitia Mathon, Virginie Marques, David Mouillot, Camille Albouy, Marco Andrello, et al.. Cross-ocean patterns and processes in fish biodiversity on coral reefs through the lens of eDNA metabarcoding. Proceedings of the Royal Society B: Biological Sciences, 2022, 289 (1973), pp.20220162. https://hal.umontpellier.fr/hal-03669624v1

2022
Madeline Steinberg, Jean-Baptiste Juhel, Virginie Marques, Clara Péron, Régis Hocdé, et al.. Similar trait structure and vulnerability in pelagic fish faunas on two remote island systems. Marine Biology, 2022, 169 (1), pp.15. https://hal.umontpellier.fr/hal-03566643v1

2022
Annisa Annisa, S.B. Andy Omar, F. Marasabessy, Ernawati Ernawati, R. Kagiling, et al.. Taxonomic note on Ellochelon vaigiensis (Quoy and Gaimard, 1825) (Mugilidae : Mugiliformes) from West New Guinea, Indonesia. Trends in Science, 2022, 19 (17), 5750 [11 p.]. https://hal.science/hal-04118796v1

2021
Andrea Polanco Fernández, Maria Mutis Martinezguerra, Virginie Marques, Francisco Villa‐navarro, Giomar Helena Borrero Pérez, et al.. Detecting aquatic and terrestrial biodiversity in a tropical estuary using environmental DNA. Biotropica, 2021, 53 (6), pp.1606-1619. https://hal.science/hal-04203573v1

2021
Jean-Baptiste Juhel, Virginie Marques, Andrea Polanco Fernandez, Giomar H. Borrero-Perez, Maria Mutis Martinezguerra, et al.. Detection of the elusive Dwarf sperm whale (Kogia sima) using environmental DNA at Malpelo island (Eastern Pacific, Colombia). Ecology and Evolution, 2021, https://hal.umontpellier.fr/hal-03413614v1

2021
Salomé Stauffer, Meret Jucker, Thomas Keggin, Virginie Marques, Marco Andrello, et al.. How many replicates to accurately estimate fish biodiversity using environmental DNA on coral reefs?. Ecology and Evolution, 2021, https://hal.umontpellier.fr/hal-03415700v1

2021
Evy Arida, Hidayat Ashari, Hadi Dahruddin, Yuli Sulistya Fitriana, Amir Hamidy, et al.. Exploring the vertebrate fauna of the Bird’s Head Peninsula (Indonesia, West Papua) through DNA barcodes. Molecular Ecology Resources, 2021, https://hal.umontpellier.fr/hal-03404293v1

2021
Andrea Polanco Fernández, Virginie Marques, Fabian Fopp, Jean-Baptiste Juhel, Giomar Helena Borrero-Pérez, et al.. Comparing environmental DNA metabarcoding and underwater visual census to monitor tropical reef fishes. Environmental DNA, 2021, The future of biodiversity monitoring and conservation utilizing environmental DNA, 3 (1), pp.142-156. https://hal.inrae.fr/hal-03810224v1

2021
Virginie Marques, Paul Castagne, Andrea Polanco Fernandez, Giomar Helena Borrero-Perez, Régis Hocdé, et al.. Use of environmental DNA in assessment of fish functional and phylogenetic diversity. Conservation Biology, 2021, https://hal.umontpellier.fr/hal-03451172v1

2020
Jean-Baptiste Juhel, Rizkie Satriya Utama, Virginie Marquès, Indra Bayu Vimono, Hagi Yulia Sugeha, et al.. Accumulation curves of environmental DNA sequences predict coastal fish diversity in the coral triangle. Proceedings of the Royal Society B: Biological Sciences, 2020, 287 (1930), pp.20200248. https://hal.science/hal-02900375v1

2020
Kadar Kadarusman, Hagi Yulia Sugeha, Laurent Pouyaud, Régis Hocdé, Intanurfemi Hismayasari, et al.. A thirteen-million-year divergence between two lineages of Indonesian coelacanths. Scientific Reports, 2020, 10 (1), https://ird.hal.science/ird-02438220v1

Erwan Delrieu-Trottin, Jean-Dominique Durand, Gino Limmon, Tedjo Sukmono, K Kadarusman, et al.. Biodiversity inventory of the grey mullets (Actinopterygii: Mugilidae) of the Indo‐Australian Archipelago through the iterative use of DNA‐based species delimitation and specimen assignment methods. Evolutionary Applications, In press, https://hal.sorbonne-universite.fr/hal-02492844v1

2019
Lucie Cocquempot, Christophe Delacourt, Jérôme Paillet, Philippe Riou, Jerome Aucan, et al.. Coastal ocean and nearshore observation : A French case study. Frontiers in Marine Science, 2019, 6, https://hal.sorbonne-universite.fr/hal-02189446v1

21 article(s)

Autres publications

2024
Régis Hocdé, Gérard Thouzeau, Erwan Amice, Laurent Borel, Mathieu Coulange, et al.. Scientific diving in France: an overview of the current practices in science. 8th European Conference on Scientific Diving (ECSD8), Apr 2024, Heraklion (Crete Island), Greece. Zenodo, 2024, https://ird.hal.science/ird-04574999v1

2023
Régis Hocdé, Gérard Thouzeau, Sophie Bourquin, Laurent Borel, Mathieu Coulange, et al.. Scientific diving in France: an overview of the current practices in science. 7th European Conference on Scientific Diving, May 2023, Roscoff, France. 1 p. multigr., 2023, https://hal.science/hal-04094861v1

2023
Régis Hocdé, C. Albouy, L. Ballesta, O. Bianchimani, T. Dejean, et al.. Challenging issues for the study of the mesophotic ecosystems by environmental DNA metabarcoding (talk). European Conference on Scientific Diving, May 2023, Roscoff, France. 23 p. https://hal.science/hal-04353108v1

2023
Sylvie Fiat, Jérôme Aucan, Christophe Menkès, Christophe Delacourt, Yannick Chancerelle, et al.. Atelier ILICO Outre-Mer Pacifique. Supports de présentation. 2023, https://hal.science/hal-04581756v1

2022
Régis Hocdé, Fiat Sylvie, David Varillon. Technologies IoT et radio: perspectives pour l'océanographie côtière. Atelier Observation LOW COAST, IR ILICO, Sep 2022, Plouzane, France. https://hal.science/hal-04581614v1

2021
Sylvie Fiat, Régis Hocdé, David Varillon. Transmission de données océanographiques via le réseau IoT LoRaWAN sur une bouée instrumentée du Service National d'Observation ReefTEMPS. JRES (Journées réseaux de l'enseignement et de la recherche ) 2021, May 2022, Marseille, France. 2022. https://hal.science/hal-04808204v1

2021
Régis Hocdé, Sylvie Fiat, David Varillon, Franck Magron, Michel Allenbach, et al.. ReefTEMPS documente l'impact local du changement climatique et les paramètres qui influent sur la résilience des écosystèmes récifaux. ILICO EVOLECO 2021: Long Term Evolution of Coastal Ecosystems, Nov 2021, La Rochelle, France. https://ird.hal.science/ird-03774373v1

2021
Emmanuel Cordier, Jérôme Aucan, Yoan Benoit, Lionel Bigot, Pascale Cuet, et al.. Développement d'un site transverse Outre-Mer ILICO pour l'observation pérenne et écosystémique d'un récif corallien à La Réunion. EVOLECO 2021, Nov 2021, La Rochelle, France. Zenodo, 2021, https://hal.science/hal-04583519v1

2021
Lucie Cocquempot, Joanne Burden, Christophe Delacourt, Jérôme Paillet, Patrick Raimbault, et al.. ILICO -A FRENCH RESEARCH INFRASTRUCTURE FOR COASTAL OCEAN AND SEASHORE OBSERVATIONS. 9th EuroGOOS International conference, Shom; Ifremer; EuroGOOS AISBL, May 2021, Brest, France. https://hal.science/hal-03349179v2

2021
Régis Hocdé, Sylvie Fiat, David Varillon, Jérôme Aucan. ReefTEMPS: the Pacific Insular coastal water observation network. 9th EuroGOOS International conference, Shom; Ifremer; EuroGOOS AISBL, May 2021, Brest, France. pp.292-295, https://hal.science/hal-03335231v2

2021
Fiat Sylvie, Jérôme Aucan, David Varillon, Régis Hocdé. ReefTEMPS, FAIRs access to Reef ecosystem environmental measurements. IMDIS 2021, Apr 2021, Amsterdam, Netherlands. , Bollettino di Geofisica, Vol.62 - Supplement, 2021, 321 pages, 62, pp.307-308, Bollettino di Geofisica. https://ird.hal.science/ird-03216386v1

2021
David Varillon, Fiat Sylvie, Franck Magron, Michel Allenbach, Thierry Hoibian, et al.. ReefTEMPS : The Pacific Island coastal ocean observation network. 2021, https://ird.hal.science/ird-03245768v1

2021
Laetitia Mathon, Virginie Marques, David Mouillot, Camille Albouy, Marco Andrello, et al.. Circumglobal distribution of fish environmental DNA in coral reefs. ARPHA Conference, ARPHA Conference Abstracts, 4, e64792 [3 p.], 2021, https://hal.science/hal-03414805v1

2017
Régis Hocdé, Indra Bayu Vimono, Amir M Suruwaki, Yosephine Tuti, Rizkie Satriya Utama, et al.. Mission report: LENGGURU 2017 Expedition ‘Biodiversity assessment in reef twilight zone and cloud forests’, R/V AIRAHA 2, 1st October 2017 – 30th November 2017, Kaimana Regency, West Papua, Indonesia. [Research Report] Institut de Recherche pour le Développement (IRD), France; Pusat Penelitian Oseanografi, Lembaga Ilmu Pengetahuan (LIPI-P2O), Indonesia; Politeknik Kelautan Dan Perikanan Sorong (Politeknik-KP-Sorong), Papua Barat, Indonesia. 2020. https://hal.science/hal-02565651v1

2020
Fiat Sylvie, David Varillon, Bernard E Pelletier, Jérôme Aucan, Régis Hocdé. ReefTEMPS, Network of coastal oceanic sensors, Open access data portal. RDA 15th plenary virtual meeting, Jan 2020, Melbourne, Australia. https://ird.hal.science/ird-03245730v1

2019
Fiat Sylvie, Régis Hocdé, David Varillon, Antoine de Ramon N’yeurt, Jérôme Aucan. Critical Success Factors of the ReefTEMPS sensors-oriented environmental information system for a real operationality.. Geospatial Sensing Conference, Sep 2019, Münster, Germany. https://ird.hal.science/ird-03245731v1

2019
Sylvie Fiat, Régis Hocdé. Critical success factors of the ReefTEMPS sensors-oriented environmental information system for a real operationality [résumé étendu]. Geospatial Sensing Conference, Sep 2019, Münster, Germany. 2 p. multigr. https://hal.science/hal-03426126v1

2019
Gérard Thouzeau, Régis Hocdé, Jean-Pierre Beurier, Laurent Borel, Mathieu Coulange, et al.. The French National Committee on Scientific Diving (CNPS): a key actor for developing scientific diving in France. 5th European Conference on Scientific Diving (ECSD), Institute of Oceanology, Polish Academy of Sciences, ​Sopot, Poland, Apr 2019, Sopot, Poland. pp.61-62, https://hal.science/hal-02123970v1

2018
Régis Hocdé, Valérie Derolez, Angelique Jadaud. MARBEC-Obs : towards a virtual observatory of marine and coastal ecosystems, mainly in Mediterranean and tropical areas. IMDIS 2018 : International Conference on Marine Data and Information Systems, Nov 2018, Barcelona, Spain. pp.211-212. https://hal.science/hal-01954486v1

2018
Sylvie Fiat, G. Brissebrat, A. Andriatiana, D. Cheype, David Varillon, et al.. SOS 2.0, la jouvence du système d'information du réseau d'observation du Pacifique Sud \"ReefTEMPS\" [Poster]. SIST 2018 : Séries Interopérables et Systèmes de Traitement, Jun 2018, Guyancourt, France. IRD, 1 p. multigr., 2018. https://hal.science/hal-03433374v1

2017
Guillaume Brissebrat, Fiat Sylvie, Andry Andriatiana, Jacques Grelet, David Varillon, et al.. Sensor Observation System : optimisation d'un système d'information environnemental dédié capteurs : exemple du SI du réseau d'observation ReefTEMPS. JRES 2017 : Journées Réseaux de l'Enseignement et de la Recherche, Nov 2017, Nantes, France. https://hal.science/hal-01859897v1

2017
Guillaume Brissebrat, Fiat Sylvie, Andry Andriatiana, Jacques Grelet, Bernard E Pelletier, et al.. Sensor Observation System : optimisation d'un système d'information environnemental dédié capteurs : exemple du SI du réseau d'observation ReefTEMPS [poster]. 12th edition of JRES “Journey to the center of the virtual”, Nov 2017, Nantes, France. https://hal.science/hal-01859844v1

2017
Andry Andriatiana, Régis Hocdé, Fiat Sylvie, David Varillon, Jacques Grelet, et al.. Porting an SOA architecture to Docker. Journées nationales du DEVeloppement logiciel 2017, CNRS, Jul 2017, Marseille, France. https://hal.science/hal-04581179v1

2017
Alain Norro, Régis Hocdé. A European competency level applied to the use of the closed circuit rebreather in scientific diving at work. First step. Highlighting the best practice. European Conference on Scientific Diving, 3, Mar 2017, Funchal (Madeira Island), Portugal. https://ird.hal.science/ird-04231773v1

2017
Régis Hocdé, Jean-Louis Menou, Laurent Pouyaud, Amir Machmud Suruwaky, Indra Bayu Vimono. At the heart of the coral triangle in West Papua: an Indonesian-French scientific exploration of a white area with closed-circuit rebreathers (eCCR) : [poster]. European Conference on Scientific Diving, Mar 2017, Funchal, Portugal. IRD, 1 p. https://ird.hal.science/ird-01512559v1

2016
Régis Hocdé, Fiat Sylvie, Guillaume Brissebrat, Bernard Pelletier. Réseau d'observation du Pacifique Sud ‘ReefTEMPS' : Évolutions fonctionnelles et optimisation d'un système d'information dédié capteurs et reconstitution de séries temporelles. SIST16 - Système Intéropérable 2016, Sep 2016, Montpellier, France. https://ird.hal.science/ird-03245778v1

2015
Fiat Sylvie, Régis Hocdé. SI-TEC-PSO: retour d'expérience sur le système d'information dédié capteurs et reconstitution de séries temporelles de ReefTEMPS.. SIST15 : Séries Interopérables et Systèmes de Traitement, Sep 2015, Marseille, France. https://ird.hal.science/ird-03245775v1

27 article(s)

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