Articles dans une revue
2025
Damien Crestel, Alain Vergnet, Frédéric Clota, Marie-Odile Blanc, Théo Navarro, et al.. Do European Seabass Larvae Grow Better in Their Natural Temperature Regime?. Evolutionary Applications, 2025, 18 (2), pp.e70083. https://hal.science/hal-05028547v1
2025
François Allal, Mathieu Besson, Emilie Delpuech, Chloé Barrier-Loiseau, Alain Vergnet, et al.. Corrigendum to “Genomic selection for individual feed efficiency in the European seabass: Response to selection on efficiency, commercial traits and sex” [Aquaculture Volume 595, Part 2, 30 January 2025, 741682].. Aquaculture, 2025, 605, pp.742499. https://hal.inrae.fr/hal-05051395v1
2025
François Allal, Mathieu Besson, Emilie Delpuech, Chloé Barrier-Loiseau, Alain Vergnet, et al.. Genomic selection for individual feed efficiency in the European seabass: Response to selection on efficiency, commercial traits and sex. Aquaculture, 2025, 595, pp.741682. https://hal.umontpellier.fr/hal-04754459v1
2024
Maeva Leitwein, G Durif, E Delpuech, P Gagnaire, B Ernande, et al.. The fate of a polygenic phenotype within the genomic landscapes of introgression in the European seabass hybrid zone. Molecular Biology and Evolution, 2024, 41 (9), pp.msae194. https://hal.umontpellier.fr/hal-04705605v1
2024
Frédéric Clota, Alexander Goikoetxea, Alain Vergnet, Marie-Odile Blanc, Stéphane Lallement, et al.. Post-larval exposure to warm temperature enhances female ratio, while starvation and photoperiod do not: The case of European seabass, Dicentrarchus labrax. Aquaculture, 2024, 586, pp.740758. https://hal.inrae.fr/hal-04517161v1
2024
Julien Roche, Ronan Griot, François Allal, Mathieu Besson, Pierrick Haffray, et al.. APIS: an updated parentage assignment software managing triploids induced from diploid parents. G3, 2024, 14 (8), https://hal.science/hal-04649084v1
2024
Laurianne Canario, Nicolas Bédère, Marc Vandeputte, Didier Boichard, Jérôme Raoul, et al.. Quelles génétiques pour les systèmes d’élevages certifiés en agriculture biologique ?. INRAE Productions Animales, 2024, 37 (2), pp.8177. https://hal.inrae.fr/hal-04703177v1
2024
Julien Roche, Mathieu Besson, François Allal, Pierrick Haffray, Pierre Patrice, et al.. GenoTriplo: A SNP genotype calling method for triploids. PLoS Computational Biology, 2024, 20 (9), pp.e1012483. https://hal.science/hal-04754946v1
2024
Oswaldo Tovar-Bohórquez, David McKenzie, Damien Crestel, Marc Vandeputte, Benjamin Geffroy. Thermal modulation of energy allocation during sex determination in the European sea bass (Dicentrarchus labrax). Gene, 2024, 927, pp.148721. https://hal.science/hal-04645484v1
2023
Julie Nati, Felipe Blasco, Charles Rodde, Alain Vergnet, François Allal, et al.. In a marine teleost, the significance of oxygen supply for acute thermal tolerance depends upon the context and the endpoint used. Journal of Experimental Biology, 2023, 226 (11), pp.jeb245210. https://hal.umontpellier.fr/hal-04100080v1
2023
Emilie Delpuech, Marc Vandeputte, Romain Morvezen, Anastasia Bestin, Mathieu Besson, et al.. Whole‐genome sequencing identifies interferon-induced protein IFI6/IFI27-like as a strong candidate gene for VNN resistance in European sea bass. Genetics Selection Evolution, 2023, 55, pp.30. https://hal.inrae.fr/hal-04116035v1
2023
Josep Calduch-Giner, Enrique Rosell-Moll, Mathieu Besson, Alain Vergnet, Jean-Sébastien Bruant, et al.. Changes in transcriptomic and behavioural traits in activity and ventilation rates associated with divergent individual feed efficiency in gilthead sea bream (Sparus aurata). Aquaculture Reports, 2023, 29, pp.101476. https://hal.umontpellier.fr/hal-03948385v1
2023
Marc Vandeputte. Novel traits and methods for selective breeding in aquaculture. AQUACULTURE REPORTS, 2023, 33, https://hal.umontpellier.fr/hal-04935203v1
2023
Etienne Verrier, Fantine Badeau, Benjamin Basso, Christine Bertrand, Pierre Boudry P, et al.. Les races locales menacées d’abandon en France : actualisation des listes et extension de la démarche à de nouvelles espèces. Ethnozootechnie, 2023, 112, pp.93. https://hal.inrae.fr/hal-04077969v1
2022
Alexander Goikoetxea, Arianna Servili, Camille Houdelet, Olivier Mouchel, Sophie Hermet, et al.. Natural cortisol production is not linked to the sexual fate of European sea bass. Fish Physiology and Biochemistry, 2022, 48 (4), pp.1117-1135. https://hal.umontpellier.fr/hal-03773801v1
2022
Hugues de Verdal, Pierrick Haffray, Vincent Douchet, Marc Vandeputte. Impact of a divergent selective breeding programme on individual feed conversion ratio in Nile tilapia Oreochromis niloticus measured in groups by video-recording. Aquaculture, 2022, 548, https://hal.inrae.fr/hal-03512072v1
2022
Mathieu Besson, Nicky Rombout, Germain Salou, Alain Vergnet, Sophie Cariou, et al.. Potential for genomic selection on feed efficiency in gilthead sea bream (Sparus aurata), based on individual feed conversion ratio, carcass and lipid traits. Aquaculture Reports, 2022, 24, https://hal.umontpellier.fr/hal-03679214v1
2022
Marc Vandeputte, Geneviève Corraze, Jérôme Doerflinger, Florian Enez, Frédéric Clota, et al.. Realised genetic gains on growth, survival, feed conversion ratio and quality traits after ten generations of multi-trait selection in rainbow trout Oncorhynchus mykiss, fed a standard diet or a “future” fish-free and soy-free diet. Aquaculture Reports, 2022, 27, pp.101363. https://hal.inrae.fr/hal-03812229v1
2021
Benjamin Geffroy, Mathieu Besson, Núria Sánchez-Baizán, Frédéric Clota, Alexander Goikoetxea, et al.. Unraveling the genotype by environment interaction in a thermosensitive fish with a polygenic sex determination system. Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (50), pp.e2112660118. https://hal.inrae.fr/hal-03485506v1
2021
Benjamin Geffroy, Manuel Gesto, Frédéric Clota, Johan Aerts, Maria J. Darias, et al.. Parental selection for growth and early-life low stocking density increase the female-to-male ratio in European sea bass. Scientific Reports, 2021, 11 (1), https://hal.inrae.fr/hal-03360565v1
2021
Jinfeng Zhao, Martin Prchal, Antti Kause, Marc Vandeputte, David Gela, et al.. The role of energy reserves in common carp performance inferred from phenotypic and genetic parameters. Aquaculture, 2021, 541, pp.736799. https://hal.inrae.fr/hal-03360569v1
2021
Ronan Griot, François Allal, Florence Phocas, Sophie Brard-Fudulea, Romain Morvezen, et al.. Optimization of Genomic Selection to Improve Disease Resistance in Two Marine Fishes, the European Sea Bass (Dicentrarchus labrax) and the Gilthead Sea Bream (Sparus aurata). Frontiers in Genetics, 2021, 12, pp.665920. https://hal.inrae.fr/hal-03360561v1
2021
Charles Rodde, Hugues de Verdal, Marc Vandeputte, François Allal, Julie Nati, et al.. An investigation of links between metabolic rate and feed efficiency in European sea bass Dicentrarchus labrax. Journal of Animal Science, 2021, 99 (6), pp.1-9. https://hal.inrae.fr/hal-03360566v1
2021
Sara Faggion, Marc Vandeputte, Alain Vergnet, Frédéric Clota, Marie-Odile Blanc, et al.. Sex dimorphism in European sea bass (Dicentrarchus labrax L.): New insights into sex-related growth patterns during very early life stages. PLoS ONE, 2021, 16 (4), pp.e0239791. https://hal.inrae.fr/hal-03206637v1
2021
Sofie Barsøe, François Allal, Alain Vergnet, Marc Vandeputte, Niels Jørgen Olesen, et al.. Different survival of three populations of European sea bass (Dicentrarchus labrax) following challenge with two variants of nervous necrosis virus (NNV). Aquaculture Reports, 2021, 19, pp.100621. https://hal.inrae.fr/hal-03150815v1
2021
Charles Rodde, Marc Vandeputte, Trong Quoc Trinh, Vincent Douchet, Marc Canonne, et al.. The Effects of Feed Restriction and Isolated or Group Rearing on the Measurement of Individual Feed Intake and Estimation of Feed Conversion Ratio in Juvenile Nile Tilapia (Oreochromis niloticus) for Selective Breeding Purposes. Frontiers in Genetics, 2021, 11, https://hal.inrae.fr/hal-03150862v1
2021
Anastasia Bestin, Olivier Brunel, Arnaud Malledant, Bastien Debeuf, Philippe Benoit, et al.. Genetic parameters of caviar yield, color, size and firmness using parentage assignment in an octoploid fish species, the Siberian sturgeon Acipenser baerii. Aquaculture, 2021, 540, pp.1-7. https://hal.inrae.fr/hal-03198203v1
2021
Pierre Boudry, François Allal, Muhammad L. Aslam, Luca Bargelloni, Tim P. Bean, et al.. Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries. Aquaculture Reports, 2021, 20, pp.100700. https://hal.umontpellier.fr/hal-03411084v1
2021
Marc Vandeputte, Anastasia Bestin, Louarn Fauchet, Jean-Michel Allamellou, Stéphane Bosc, et al.. Can we identify wild-born salmon from parentage assignment data? A case study in the Garonne-Dordogne rivers salmon restoration programme in France. Aquatic Living Resources, 2021, 34, pp.1-10. https://hal.inrae.fr/hal-03188874v1
2021
Ronan Griot, François Allal, Florence Phocas, Sophie Brard-Fudulea, Romain Morvezen, et al.. Genome-wide association studies for resistance to viral nervous necrosis in three populations of European sea bass (Dicentrarchus labrax) using a novel 57k SNP array DlabChip. Aquaculture, 2021, 530, pp.735930. https://hal.inrae.fr/hal-03544239v1
2020
Charles Rodde, Hugues de Verdal, Sébastien Lefebvre, Christophe Menniti, Marc Vandeputte, et al.. Variations in isotope incorporation rates and trophic discrimination factors of carbon and nitrogen stable isotopes in scales from three European sea bass (Dicentrarchus labrax) populations. Journal of Experimental Marine Biology and Ecology, 2020, 533, pp.151468. https://hal.science/hal-03097301v1
2020
Marc Vandeputte, Frédéric Clota, Bastien Sadoul, Marie‐odile Blanc, Eva Blondeau‐bidet, et al.. Low temperature has opposite effects on sex determination in a marine fish at the larval/postlarval and juvenile stages. Ecology and Evolution, 2020, 10 (24), pp.13825-13835. https://hal.inrae.fr/hal-03150869v1
2020
Charles Rodde, Marc Vandeputte, François Allal, Mathieu Besson, Frédéric Clota, et al.. Population, Temperature and Feeding Rate Effects on Individual Feed Efficiency in European Sea Bass (Dicentrarchus labrax). Frontiers in Marine Science, 2020, 7, https://hal.inrae.fr/hal-03150873v1
2020
Charles Rodde, Béatrice Chatain, Marc Vandeputte, Trong Quoc Trinh, John A.H. Benzie, et al.. Can individual feed conversion ratio at commercial size be predicted from juvenile performance in individually reared Nile tilapia Oreochromis niloticus?. Aquaculture Reports, 2020, 17, pp.100349. https://hal.inrae.fr/hal-03150877v1
2020
Simon Mackenzie, Arjan Palstra, Josep Planas, David J Mckenzie, Marie‐laure Bégout, et al.. Aerobic swimming in intensive finfish aquaculture: applications for production, mitigation and selection. Reviews in Aquaculture, 2020, 13 (1), pp.138-155. https://hal.science/hal-03097375v1
2020
Sara Faggion, Pierre Sanchez, Marc Vandeputte, Frédéric Clota, Alain Vergnet, et al.. Evaluation of a European sea bass (Dicentrarchus labrax L.) post-larval tagging method with ultra-small RFID tags. Aquaculture, 2020, 520, pp.734945. https://hal.inrae.fr/hal-03150884v1
2020
Marc Vandeputte, Clémence Fraslin, Pierrick Haffray, Anastasia Bestin, François Allal, et al.. How to genetically increase fillet yield in fish: Relevant genetic parameters and methods to predict genetic gain. Aquaculture, 2020, 519, pp.734877. https://hal.inrae.fr/hal-03150887v1
2019
Hugues de Verdal, Catherine Maeve O'Connell, Wagdy Mekkawy, Marc Vandeputte, Béatrice Chatain, et al.. Agonistic behaviour and feed efficiency in juvenile Nile tilapia Oreochromis niloticus. Aquaculture, 2019, 505, pp.271-279. https://hal.umontpellier.fr/hal-02384770v1
2019
Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Jean-Michel Allamellou, et al.. First evidence of realized selection response on fillet yield in Rainbow trout Oncorhynchus mykiss, Using Sib selection or based on correlated ultrasound measurements. Frontiers in Genetics, 2019, 10, pp.1-13. https://hal.inrae.fr/hal-02627462v1
2019
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Combining Individual Phenotypes of Feed Intake With Genomic Data to Improve Feed Efficiency in Sea Bass. Frontiers in Genetics, 2019, 10, pp.1-14. https://hal.science/hal-02403255v1
2019
Ronan Griot, Francois Allal, Sophie Brard-Fudulea, Romain Morvezen, Pierrick Haffray, et al.. APIS: An auto-adaptive parentage inference software that tolerates missing parents. Molecular Ecology Resources, 2019, pp.1-12. https://hal.science/hal-02434174v1
2019
Marc Vandeputte, P.-A. Gagnaire, F. Allal. The European sea bass: a key marine fish model in the wild and in aquaculture. Animal Genetics, 2019, 50 (3), pp.195-206. https://hal.science/hal-02395941v1
2019
Sara Faggion, Marc Vandeputte, Béatrice Chatain, Pierre-Alexandre Gagnaire, François Allal. Population-specific variations of the genetic architecture of sex determination in wild European sea bass Dicentrarchus labrax L.. Heredity, 2019, 122 (5), pp.612-621. https://hal.science/hal-02395931v1
2018
Christos Palaiokostas, Sophie Cariou, Anastasia Bestin, Jean-Sebastien Bruant, Pierrick Haffray, et al.. Genome-wide association and genomic prediction of resistance to viral nervous necrosis in European sea bass (Dicentrarchus labrax) using RAD sequencing. Genetics Selection Evolution, 2018, 50 (1), pp.1-11. https://hal.science/hal-01826622v1
2018
Dafni Anastasiadi, Marc Vandeputte, Nuria Sanchez-Baizan, Francois Allal, Francesc Piferrer. Dynamic epimarks in sex-related genes predict gonad phenotype in the European sea bass, a fish with mixed genetic and environmental sex determination. Epigenetics, 2018, 13 (9), pp.988-1011. https://hal.science/hal-01994184v1
2017
J.E.J. Hillen, I. Coscia, Marc Vandeputte, K. Herten, B. Hellemans, et al.. Estimates of genetic variability and inbreeding in experimentally selected populations of European sea bass. Aquaculture, 2017, 479, pp.742-749. https://hal.science/hal-01583182v1
2017
Hugues de Verdal, Wagdy Mekkawy, Curtis E. Lind, Marc Vandeputte, Beatrice Chatain, et al.. Measuring individual feed efficiency and its correlations with performance traits in Nile tilapia, Oreochromis niloticus. Aquaculture, 2017, 468, Part A, pp.489-495. https://hal.science/hal-01530809v1
2017
Marc Vandeputte, Antonio Puledda, Anne Sophie Tyran, Anastasia Bestin, Céline Coulombet, et al.. Investigation of morphological predictors of fillet and carcass yield in European sea bass (Dicentrarchus labrax) for application in selective breeding. Aquaculture, 2017, 470, pp.40-49. https://hal.science/hal-01595276v1
2017
Bruno Guinand, Marc Vandeputte, Mathilde Dupont-Nivet, Alain Vergnet, Pierrick Haffray, et al.. Metapopulation patterns of additive and nonadditive genetic variance in the sea bass (Dicentrarchus labrax). Ecology and Evolution, 2017, 7 (8), pp.2777-2790. https://hal.science/hal-01606597v1
2017
Hugues de Verdal, Hans Komen, Edwige Quillet, Béatrice Chatain, François Allal, et al.. Improving feed efficiency in fish using selective breeding: a review. Reviews in Aquaculture, 2017, 10 (4), pp.1-19. https://hal.science/hal-01602277v1
2017
Q.K. Doan, Marc Vandeputte, B. Chatain, Thierry Morin, F. Allal. Viral encephalopathy and retinopathy in aquaculture: a review. Journal of Fish Diseases, 2017, 40 (5), pp.717-742. https://hal.science/hal-01533903v1
2016
Jean-Noël Hubert, François Allal, Caroline Hervet, Monique Ravakarivelo, Zsigmond Jeney, et al.. How could fully scaled carps appear in natural waters in Madagascar?. Proceedings of the Royal Society B: Biological Sciences, 2016, 283 (1837), pp.1-8. https://hal.umontpellier.fr/hal-01924181v1
2016
Marc Vandeputte, J.D. Porte, Benoît Aupérin, Mathilde Dupont-Nivet, A. Vergnet, et al.. Quantitative genetic variation for post-stress cortisol and swimming performance in growth-selected and control populations of European sea bass (Dicentrarchus labrax). Aquaculture, 2016, 455, pp.1-7. https://hal.science/hal-01259738v1
2016
Sebastien Ferrari, Khaled Horri, François Allal, Alain Vergnet, David Benhaim, et al.. Heritability of boldness and hypoxia avoidance in European seabass, Dicentrarchus labrax. PLoS ONE, 2016, 11 (12), pp.1-16. https://hal.science/hal-01602254v1
2015
Christos Palaiokostas, Michaël Bekaert, John B. Taggart, Karim Gharbi, Brendan J. Mcandrew, et al.. A new SNP-based vision of the genetics of sex determination in European sea bass (Dicentrarchus labrax). Genetics Selection Evolution, 2015, 47 (1), pp.68. https://hal.science/hal-01341305v1
2015
C. Costa, Marc Vandeputte, F. Antonucci, C. Boglione, H. de Verdal, et al.. Are trunk lateral line anomalies and disoriented scale patterns in European seabass (Dicentrarchus labrax) influenced by genetics?. Aquaculture, 2015, 448, pp.38-43. https://hal.science/hal-01535291v1
56 article(s)
Autres publications
2024
Théo Navarro, Tallulah Bailey, Damien Crestel, Alain Vergnet, Aurelien Lledo, et al.. Using Swimming Respirometry to Investigate the Thermal Physiology of European Seabass Populations. American Fisheries Society annual congress, Sep 2024, Honololu, United States. https://hal.science/hal-04732751v1
2024
Sarah Nahon, Gatien Debailleul, François Allal, Marc Vandeputte, Christophe Menniti, et al.. Carbon and nitrogen stable isotopes: Is it a good proxy of individual efficiency in seabass (Dicentrarchus labrax)?. AQUA2024, Aug 2024, Copenaghe, Denmark. https://hal.science/hal-04725151v1
2024
Debailleul Gatien, Nahon Sarah, Allal François, Vandeputte Marc, Vergnet Alain. BarIsOTop : Peut-on utiliser les isotopes stables du carbone et de l’azote pour prédire l’efficacité alimentaire chez le bar (Dicentrarchus labrax). 8ème Journées de la Recherche Filière Piscicole, Jul 2024, Rennes, France. https://hal.science/hal-04725115v1
2024
Théo Navarro, Damien Crestel, Alain Vergnet, Martin Debatis, Amy-Jo Randalls, et al.. Impacts of Heatwaves and Hypoxia on European seabass Dicentrarchus labrax Reared in Three Thermal Regimes. Society for Experimental Biology annual conference, Jul 2024, Pragues, République tchèque. https://hal.inrae.fr/hal-04732617v1
2014
Jonathan D’ambrosio, Romain Morvezen, Florence Phocas, François Allal, Marc Vandeputte, et al.. 2014-2024 : MISE EN PLACE ET EVOLUTION DE LA SÉLECTION GÉNOMIQUE DANS LA FILIÈRE AQUACOLE FRANÇAISE. Journées de la Recherche Filière Piscicole, ITAVI, Jul 2024, Rennes, France. https://hal.science/hal-04796774v1
2024
Gatien Debailleul, Sarah Nahon, François Allal, Marc Vandeputte, Alain Vergnet. BarIsOTop : Existe-t-il une corrélation entre l’efficacité alimentaire et les isotopes stables du carbone et de l’azote chez le bar Dicentrarchus labrax ?. Journée de la Societé Française d'Aquaculture Marine, Mar 2024, Montpellier, France. https://hal.science/hal-04725138v1
2023
Julien Roche, Mathieu Besson, Pierre Patrice, Pierrick Haffray, François Allal, et al.. Génotypage de triploïdes à partir de puces à ADN et Assignation de parenté. Journées Techniques Interfilières SYSAAF, Oct 2023, Rennes, France. https://hal.inrae.fr/hal-04251343v1
2023
Damien Crestel, Alain Vergnet, Frédéric Clota, Marie-Odile Blanc, Stéphane Lallement, et al.. Larval growth and differential survival in three natural populations of European seabass (Dicentrarchus labrax) exposed to four thermal regimes. Aquaculture Europe 2023, Sep 2023, Wien, Austria. https://hal.science/hal-04185974v1
2023
Mathieu Besson, Julien Roche, Pierre Patrice, Pierrick Haffray, François Allal, et al.. AN R-BASED PIPELINE FOR GENOTYPE CALLING AND PARENTAGE ASSIGNMENT OF TRIPLOID OFFSPRING TO THEIR DIPLOID PARENTS. Aquaculture Europe 2023, Sep 2023, Vienne, Austria. https://hal.inrae.fr/hal-04385840v1
2023
M Oswaldo Tovar Bohórquez, Damien Crestel, Marc Vandeputte, Arianna Servili, Benjamin Geffroy. Temperature driven growth impairment is differentially mediated by ghrelin during the early development of Dicentrarchus labrax. Inside Out: New Frontiers in the Comparative Physiology of the Vertebrate Gut, Jun 2023, Eastwell Manor, Kent, United Kingdom. https://hal.science/hal-04185958v1
2023
Marc Vandeputte. Breeding plans for disease resistance in Mediterranean species. XXVII Convegno Nazionale Società Italiana di Patologia Ittica, Jun 2023, Gênes, Italy. https://hal.science/hal-04185986v1
2023
Marc Vandeputte. Successful genetic improvement of feed efficiency in seabass by alternative methods. NMBU Genetics and Breeding Seminars, May 2023, As, Norway. https://hal.science/hal-04185991v1
2023
Benjamin Geffroy, Mathieu Besson, Núria Sánchez-Baizán, Frédéric Clota, Alexander Goikoetxea, et al.. Genotype by environment interaction explain sex determination in the European Seabass. 12th International Symposium on Reproductive Physiology of Fish, May 2023, Hersonisos - Crète, Greece. https://hal.science/hal-04185947v1
2023
Faten Jaouahdou, Florian Enez, Christophe Eklouh-Molinier, Jérôme Doerflinger, Guylaine Collewet, et al.. Phenomic selection, an alternative to genomic selection in animal breeding?. Workshop spectroscopie et microscopie du milieu marin, Feb 2023, Brest, France. https://hal.inrae.fr/hal-04185933v1
2023
Benjamin B. Basso, Christine Bertrand, Pierre Boudry, Bertrand Bouffartigue, Eleonore Charvolin-Lemaire, et al.. Étude concernant l’actualisation, la définition et les exemples de valorisation des races locales, rustiques, menacées\r\nVolet 1 -Races menacées - Actualisation des listes de races menacées - Extension de la réflexion aux abeilles et aux espèces aquacoles. Inrae. 2023. https://hal.inrae.fr/hal-04488379v1
2022
Jonathan D’ambrosio, Anastasia Bestin, Mathieu Besson, Romain Morvezen, Aline Bajek, et al.. Efficiency of genomic selection by imputation in sea bass and sea bream to improve processing traits and resistance to Viral Nervous Necrosis. XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. https://hal.inrae.fr/hal-04185895v1
2022
Marc Vandeputte, Geneviève Corraze, Jérôme Doerflinger, Florian Enez, Frédéric Clota, et al.. Effect of 10 generations of selection on growth, feed efficiency, processing and lipid traits in rainbow trout fed a standard or a \"future\" fish-free, soy-free diet. International Symposium on Genetics In Aquaculture 2022, Nov 2022, Puerto Varas, Chile. https://hal.inrae.fr/hal-04178939v1
2022
Emilie Delpuech, Marc Vandeputte, Romain Morvezen, Anastasia Bestin, Mathieu Besson, et al.. IFI6, an interferon alpha induced protein, identified by whole genome sequencing as involved in Viral Nervous Necrosis resistance in European sea bass (Dicentrarchus labrax). International Symposium on Genetics in Aquaculture XIV, Nov 2022, Puerto Varas, Chile. https://hal.inrae.fr/hal-04185918v1
2022
Anastasia Bestin, Jonathan D’ambrosio, Mathieu Besson, F Massieu, Alain Vergnet, et al.. Can genomics improve the selection efficiency of sea bream (Sparus aurata) candidates reared in sanitary protected RAS when GxE exist with the production environment in open-sea cages?. XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. https://hal.inrae.fr/hal-04185868v1
2022
Faten Jaouahdou, Florian Enez, Christophe Eklouh-Molinier, Jérôme Doerflinger, Guylaine Collewet, et al.. Phenomic selection, an alternative to genomic selection in animal breeding?. International Symposium on Genetics in Aquaculture XIV, Nov 2022, Puerto Varas, Chile. https://hal.inrae.fr/hal-04185835v1
2022
Jonathan D’ambrosio, Tarek Chalioui, Jean Ruche, Alexandre Desgranges, Marc Vandeputte, et al.. Interest of artificial intelligence to predict fillet yield in rainbow trout. XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. https://hal.science/hal-04185903v1
2022
Alain Vergnet, Marc Vandeputte, Jean-Jacques Lareyre, François Allal. Germ stem cell grafting in european sea bass: a practical approach. Aquaculture Europe 2022, Sep 2022, Rimini, Italy. https://hal.inrae.fr/hal-03911893v1
2022
Marc Vandeputte, Frédéric Clota, Alain Vergnet, Marie-Odile Blanc, Stéphane Lallement, et al.. Can we combine genetics and a two-step temperature control to move towards monosex European seabass Dicentrarchus labrax?. Aquaculture Europe 2022, Sep 2022, Rimini, Italy. https://hal.inrae.fr/hal-04185712v1
2022
Emilie Delpuech, Marc Vandeputte, Florence Phocas, Anastasia Bestin, Mathieu Besson, et al.. Fine mapping for Viral Nervous Necrosis resistance in European sea bass (Dicentrarchus labrax) identified by whole genome sequencing. Aquaculture Europe 2022, Sep 2022, Rimini, Italy. https://hal.inrae.fr/hal-04185721v1
2022
François Allal, Mathieu Besson, Alain Vergnet, David J Mckenzie, Frédéric Clota, et al.. Improving feed efficiency in fish: let’s get down to business. Aquaculture Europe 2022, Sep 2022, Rimini, Italy. https://hal.inrae.fr/hal-04185734v1
2022
Emilie Delpuech, Marc Vandeputte, Florence Phocas, Yoannah François, Anastasia Bestin, et al.. Cartographie fine de la résistance à la nécrose nerveuse virale chez le bar identifiée par séquençage du génome entier. 7èmes Journées Recherche Filière Piscicole, Jul 2022, Paris, France. https://hal.inrae.fr/hal-04185459v1
2022
Jonathan D’ambrosio, Mathieu Besson, Anastasia Bestin, Jean-Sébastien Bruant, Aline Bajek, et al.. Réduction du coût de la sélection génomique par utilisation de panels à plus faible densité de marqueurs chez le bar et la daurade. 7. Journées de la Recherche Piscicole, Jul 2022, Paris, France. https://anses.hal.science/anses-03889117v1
2022
Frédéric Clota, Benjamin Geffroy, Alain Vergnet, Marie-Odile Blanc, François Ruelle, et al.. Les hautes températures en phase juvénile favorisent la croissance et la différenciation femelle du bar (Dicentrarchus labrax L.). 7émes Journées Recherche Filière Piscicole, Jul 2022, Paris, France. https://hal.science/hal-04185410v1
2022
Marc Vandeputte. AQUAEXCEL3.0 : une opportunité pour nouer des collaborations à l’étranger en R&D aquacole. 7èmes Journées recherche Filière Piscicole, Jul 2022, Paris, France. https://hal.science/hal-04185430v1
2022
Marc Vandeputte, Geneviève Corraze, Jérôme Doerflinger, Florian Enez, Frédéric Clota, et al.. Evolution des performances de la truite arc-en-ciel après 10 générations de sélection et réponse à un aliment standard ou « futur » sans produits de poisson ni soja. 7èmes Journées Recherche Filière Piscicole, Jul 2022, Paris, France. https://hal.inrae.fr/hal-04185413v1
2022
Damien Crestel, Alain Vergnet, Marie-Odile Blanc, Stéphane Lallement, Frédéric Clota, et al.. Etude de la croissance larvaire chez trois populations naturelles de bar (Dicentrarchus labrax) soumises à quatre régimes thermiques. 7èmes Journées recherche Filière Piscicole, Jul 2022, Paris, France. https://hal.science/hal-04185425v1
2022
Mathieu Besson, Romain Morvezen, Anastasia Bestin, Yoannah François, Aline Bajek, et al.. Selective breeding for survival to Vibrio harveyi in European seabass ( Dicentrarchus labrax ) is robust to different feeding environments. World Congress on Genetics Applied to Livestock Production, Jul 2022, Rotterdam, Netherlands. pp.688-691, https://hal.science/hal-04185398v1
2022
Emilie Delpuech, Marc Vandeputte, Florence Phocas, Anastasia Bestin, Mathieu Besson, et al.. WHOLE GENOME SEQUENCING TO REFINE THE DETECTION OF QTL FOR VIRAL NERVOUS NECROSIS IN EUROPEAN SEA BASS (DICENTRARCHUS LABRAX). 6th symposium on Genomics in Aquaculture Symposium, May 2022, Grenade, Spain. https://hal.inrae.fr/hal-04116026v1
2022
Núria Sánchez-Baizán, J Denkena, François Allal, Maria Colome-Tatche, Marc Vandeputte, et al.. Development of epigenetic biomarkers for the European seabass (Dicentrarchus labrax). 6th Symposium on Genomics in Aquaculture, May 2022, Grenade, Spain. https://hal.inrae.fr/hal-04185380v1
2022
Maeva Leitwein, Ghislain Durif, Pierre-Alexandre Gagnaire, Alain Vergnet, Frédéric Clota, et al.. Using genome-wide ancestry pattern in European sea bass to assess phenotypic variation and ensure sustainable aquaculture. 6th Symposium on Genomics in Aquaculture, May 2022, Grenade, Spain. https://hal.inrae.fr/hal-04185352v1
2022
François Allal, Mathieu Besson, Núria Sánchez-Baizán, Frédéric Clota, Alexander Goikoetxea, et al.. Combined genomic approaches to unravel sex determination in the European seabass. 6. Symposium on Genomics in Aquaculture, May 2022, Grenade, Spain. https://hal.inrae.fr/hal-04185371v1
2021
Mathieu Besson, David J Mckenzie, Julie J.H Nati, Salou Germain, Alain Vergnet, et al.. Phenotypic and genomic correlations between feed efficiency and metabolic traits in European sea bass. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360559v1
2021
Anastasia Bestin, Mathieu Besson, Alain Vergnet, François Allal, Frédéric Clota, et al.. Genetic correlations between processing traits and individual feed efficiency in a gilthead sea bream (Sparus aurata) commercial line. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360548v1
2021
Charles Rodde, Marc Vandeputte, Trong Quoc Trinh, John A. H. Benzie, Hugues de Verdal. Predicting feed conversion ratio at commercial size from juvenile performance in individually reared Oreochromis niloticus. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360555v1
2021
Alain Vergnet, Frédéric Clota, Edoh Denis, François Ruelle, Marie-Odile Blanc, et al.. Phenotypic characterization of the three main natural populations of seabass (Dicentrarchus labrax) on growth and quality traits performances. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. . https://hal.inrae.fr/hal-03360553v1
2021
Frédéric Clota, Benjamin Geffroy, Alain Vergnet, Marie-Odile Blanc, Stéphane Lallement, et al.. Late high temperature promotes fast growth and female differentiation in European sea bass Dicentrarchus labrax, while early photoperiod has no effect on either trait. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360551v1
2021
Sara Faggion, Duranton Maud, Pierre-Alexandre Gagnaire, Marc Vandeputte, François Allal. Genomically assisted reconstruction of the ancestral Dicentrarchus labrax L. Mediterranean lineage. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360557v1
2021
François Allal, Mathieu Besson, Bastien Sadoul, François Ruelle, Pegart Mako, et al.. Genomic prediction and genotype-by-temperature interaction of sex tendency in European sea bass.. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360554v1
2020
Anastasia Bestin, Sophie S. Cariou, Jean-Sébastien J.-S. Bruant, Marc Vandeputte, Florian Enez, et al.. Combining data from successive cohorts to increase the accuracy of estimated breeding values: a case study in a gilthead sea bream (Sparus aurata) commercial line. Aquaculture Europe 2020 online, Apr 2021, Cork, Ireland. https://hal.inrae.fr/hal-03187498v1
2020
Sara Faggion, Marc Vandeputte, Alain Vergnet, Frédéric Clota, Marie‐odile Blanc, et al.. Sex dimorphism in European sea bass (Dicentrarchus labrax L.) : new insights into sex-related growth patterns during very early life stages. Aquaculture Europe 2020 online, Apr 2021, Cork, Ireland. https://hal.inrae.fr/hal-03187478v1
2020
Marc Vandeputte, Geneviève Corraze, Jérôme Doerflinger, Florian Enez, Frédéric Clota, et al.. Evaluation of genetic gain in rainbow trout fed standard of “future” diet after 10 generations of multi-trait selection in the Aqualande selective breeding program. Aquaculture Europe 2020 Online, Apr 2021, Cork, Ireland. https://hal.inrae.fr/hal-03187469v1
2020
Ronan Griot, François Allal, Florence Phocas, Sophie Brard-Fudulea, Romain Morvezen, et al.. Genome wide association studies revealed one strong effect QTL for viral nervous necrosis resistance in European sea bass (Dicentrarchus labrax). Aquaculture Europe 2020, Apr 2021, Cork, Ireland. https://hal.inrae.fr/hal-03198222v1
2020
Marc Vandeputte, Geneviève Corraze, Florian Enez, Pierrick Haffray, Jérôme Doerflinger, et al.. Réponse à 10 générations de sélection multicaractères chez la truite chez Aqualande. Journées techniques du Sysaaf, Dec 2020, Rennes, France. https://hal.inrae.fr/hal-03187464v1
2020
Marc Vandeputte, Benjamin Geffroy. Le stress a-t-il un effet sur le sexe des bars ?. Journées techniques du Sysaaf, Dec 2020, Rennes, France. https://hal.inrae.fr/hal-03187458v1
2020
Sara Faggion, Maud Duranton, Pierre-Alexandre Gagnaire, Marc Vandeputte, François Allal. Genomically assisted reconstruction of the ancestral Dicentrarchus labrax Mediterranean lineage. 6th International Symposium Genomics in Aquaculture, Sep 2020, Granada, Spain. https://hal.inrae.fr/hal-03187502v1
2020
Nuria Sanchez-Baizan, Marc Vandeputte, François Allal, Francesc Piferrer. Multigenerational epigenetic inheritance of masculinizing temperatures in the European sea bass. 6th International Symposium Genomics in Aquaculture, Sep 2020, Granada, Spain. https://hal.inrae.fr/hal-03187504v1
2019
Marc Vandeputte, Clémence Fraslin, Pierrick Haffray, Anastasia Bestin, François Allal, et al.. How to genetically increase fillet yield in fish: relevant genetic parameters and methods for the estimation of genetic gain. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. https://hal.inrae.fr/hal-03187446v1
2019
Marc Vandeputte. Introducing AQUAEXCEL2020 and its relevance to industry. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. https://hal.inrae.fr/hal-03187455v1
2019
Charles Rodde, Marc Vandeputte, François Allal, Mathieu Besson, Alain Vergnet, et al.. Individual feed intake and body weight gain relationship according to genetic origin and rearing temperature in European sea bass Dicentrarchus labrax. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. . https://hal.inrae.fr/hal-03187449v1
2019
Daniel Montero, S. Torrecillas, Douglas R. Tocher, Marc Vandeputte, Fontanillas Ramon, et al.. Development of fish feeds and feeding strategies for genetically superior fish from breeding programmes. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. https://hal.inrae.fr/hal-03187450v1
2019
Nuria Sanchez-Baizan, Dafni Anastasiadi, Marc Vandeputte, François Allal, Francesc Piferrer. Epigenetic inheritance and integration of masculinizing temperatures of the European sea bass (Dicentrarchus labrax). Epigenetic inheritance Symposium, Aug 2019, Zurich, Switzerland. https://hal.inrae.fr/hal-03187444v1
2019
Hugues de Verdal, Charles Rodde, Marc Cannone, Marc Vandeputte, Pierrick Haffray. Possibilité d’amélioration génétique de l’efficacité alimentaire chez le tilapia du Nil – projet DADA-EAT. 6emes Journées Recheche Filière Piscicole, Jul 2019, Paris, France. https://hal.inrae.fr/hal-03187441v1
2019
Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Jean-Michel Allamelou, et al.. Réponse à la sélection sur le rendement de filet chez la truite arc-en-ciel. 6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France. https://hal.inrae.fr/hal-02734410v1
2019
Mathieu Besson, François Allal, Alain Vergnet, Frédéric Clota, Sophie Cariou, et al.. Améliorer l'efficacité alimentaire des poissons en utilisant une nouvelle méthode de phénotypage en aquarium individuel. 6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France. https://hal.science/hal-02264927v1
2019
Mathieu Besson, Marc Vandeputte, François Allal, Patrick Prunet, Marie-Laure Bégout, et al.. Accounting for genetic variability in fitness-related traits using a Dynamic Energy Budget model, an example on European Seabass. 6. International Symposium and Thematic School on ‘Dynamic energy Budget theory for metabolic organization’ (DEB2019), Apr 2019, Brest, France. pp.47. https://hal.inrae.fr/hal-03187437v1
2019
Marc Vandeputte, Pierrick Haffray, Anastasia Bestin, François Allal, Mathilde Dupont-Nivet. Interaction génotype x aliment: que sait-on, où va-t-on ?. Journée du SFAM, Mar 2019, Montpellier, France. https://hal.inrae.fr/hal-03187439v1
2018
Marc Vandeputte, Francesc Piferrer. Genetic and Environmental Components of Sex Determination in the European Sea Bass. Sex Control in Aquaculture, John Wiley & Sons, Ltd, pp.305-325, 2018, 978-1-119-12728-4. https://hal.inrae.fr/hal-03150926v1
2018
Hugues de Verdal, Marc Vandeputte, Catherine O'Connell, Marie Laure Begout, Wagdy Mekkawy, et al.. Measuring individual feed efficiency and its correlations with performances and agonistic behaviours in juvenile Nile Tilapia Oreochromis niloticus held in groups. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187148v1
2018
François Allal, Quoc Khanh Doan, Béatrice Chatain, Alain Vergnet, Pierrick Haffray, et al.. Genome-wide association study and genomic evaluations for resistance to Viral Nervous Necrosis in wild populations of European seabass Dicentrarchus labrax. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187164v1
2018
Marc Vandeputte, François Allal, Dafni Anastasiadi, Alexandre Vasilescu, Benjamin Geffroy, et al.. Accurate genomic prediction of phenotypic sex within European sea bass families : a unique tool to understand and control sex ratio variations in a species with polygenic sex determination. AQUA 2018, Aug 2018, Montpellier, France. . https://hal.inrae.fr/hal-03187169v1
2018
François Allal, Maud Duranton, Romain Morvezen, Sophie Brard-Fudulea, Charles Poncet, et al.. Development and characterization of a 57K Single Nucleotide Polymorphism array for European sea bass. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187160v1
2018
Sara Faggion, Marc Vandeputte, Béatrice Chatain, Pierre-Alexandre Gagnaire, François Allal. Population-specific variations of the genetic architecture of sex determination in wild European sea bass Dicentrarchus labrax L.. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187154v1
2018
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Selective breeding on tolerance to fasting improves feed conversion ratio of sea bass. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187434v1
2018
Marc Vandeputte. An introduction to the AQUAEXCEL2020 Project. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187166v1
2018
Benjamin Geffroy, Marc Vandeputte, Marie‐odile Blanc, Frédéric Clota, Bastien Sadoul, et al.. Sex determination of the European sea bass : deciphering the role of temperature over the whole larval period to enhance female production. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187433v1
2018
Ronan Griot, François Allal, Sophie Brard-Fudulea, Sophie S. Cariou, Pierrick Haffray, et al.. APIS: A new auto-adaptive parentage inference software tolerant to missing parents. 13th International Symposium Genetics in Aquaculture, Jul 2018, Cairns, Australia. https://hal.inrae.fr/hal-03187121v1
2018
Hugues de Verdal, Marc Vandeputte, Wagdy Mekkawy, Béatrice Chatain, John A. H. Benzie. Estimation of the genetic parameters of feed efficiency in juvenile Nile Tilapia (Oreochromis niloticus) using video analyses. 13th International Symposium Genetics in Aquaculture, Jul 2018, Cairns, Australia. https://hal.inrae.fr/hal-03187106v1
2018
Romain Morvezen, Anastasia Bestin, Anne-Sophie Tiriau, Laurane Pallandre, Joelle Cabon, et al.. Heritabilities of resistance to VNN and vibriosis and genetic correlations with production traits and processing yields in two selected commercial lines of the European sea bass Dicentrarchus labrax. 13th International Symposium Genetics in Aquaculture, Jul 2018, Cairns, Australia. https://hal.inrae.fr/hal-03187102v1
2018
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Genetic improvement of feed conversion ratio in sea bass : new approach based on individual phenotypes and genomic info. Genetics and Breeding in Aquaculture: North meets South, May 2018, Bergen, Norway. https://hal.inrae.fr/hal-03156894v1
2018
François Allal, Ronan Griot, Pierre-Alexandre Gagnaire, Romain Morvezen, Sophie Brard, et al.. Des puces pour prédire l’avenir…. Journées du SFAM (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2018, Montpelllier, France. https://hal.inrae.fr/hal-03156824v1
2018
Benjamin Geffroy, Marc Vandeputte. Le sexe du bar, on en voit le bout. Journée du SFAM, Mar 2018, Montpelllier, France. https://hal.inrae.fr/hal-03156828v1
2018
Mathieu Besson, Francois Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Sélection du bar pour l’efficacité alimentaire: on y arrive. Journée du SFAM, Mar 2018, Montpellier, France. https://hal.inrae.fr/hal-03156814v1
2018
Florian Enez, Bénédicte Lorgeoux, Mahunon H, Jérôme Bugeon, Marc Vandeputte, et al.. Genetic parameters for growth and colour traits in Pacific blue shrimp Litopenaeus stylirostris in a mixed family design with SNP parentage assignement in New-Caledonia. 11. World Congress on Genetics Applied to Livestock Production, Feb 2018, Auckland, New Zealand. https://hal.inrae.fr/hal-03156790v1
2018
Christos Palaiokostas, Martin Kocour, Tomáš Veselý, Sophie Cariou, Anastasia Bestin, et al.. Breeding for disease resistance in farmed fish in the era of high-throughput sequencing. 11th World Congress on Genetics Applied to Livestock Production, Feb 2018, Auckland, New Zealand. https://hal.inrae.fr/hal-03156780v1
2018
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Estimation of genetic parameters of feed conversion ratio based on individual phenotypes in sea bass. 11th World Congress on Genetics Applied to Livestock Production, Feb 2018, Auckland, New Zealand. https://hal.inrae.fr/hal-03156802v1
2018
Bastien Sadoul, Xavier Cousin, Marc Vandeputte, Isabelle Leguen, Frédéric Clota, et al.. Thermal imprinting during embryogenesis and future adaptive capacities in European seabass. 3. International Congress on Applied Ichthyology and Aquatic Environment, 2018, Volos, Greece. https://hal.science/hal-02012647v1
2017
François Allal, Quoc Khanh Doan, Béatrice Chatain, Alain Vergnet, Gilles Breuil, et al.. Héritabilité de la résistance à la nécrose nerveuse virale de populations sauvages de Bar/Loup (Dicentrarchus labrax). Journées techniques du Sysaaf, Dec 2017, Rennes, France. https://hal.inrae.fr/hal-03156758v1
2017
François Allal, Ronan Griot, Pierre-Alexandre Gagnaire, Christophe Klopp, Aline Bajek, et al.. GENESEA : développement de la sélection génomique chez le bar et la daurade. Journées Techniques du Sysaaf, Dec 2017, Rennes, France. https://hal.inrae.fr/hal-03156734v1
2017
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Sélectionner sur l’efficacité alimentaire : une nouvelle approche chez le bar. Journées Techniques du Sysaaf, Dec 2017, Rennes, France. https://hal.inrae.fr/hal-03156749v1
2017
Benjamin Geffroy, Marc Vandeputte. Projet FEAMP 3S : Seabass, sex and stress. Journées techniques du Sysaaaf, Dec 2017, Rennes, France. https://hal.inrae.fr/hal-03156715v1
2017
François Allal, Marc Vandeputte, Alain Vergnet, Frédéric Clota, Mathieu Besson, et al.. Efficacité d’une sélection pour la résistance au jeûne. Journées Techniques du Sysaaf, Dec 2017, Rennes, France. https://hal.inrae.fr/hal-03156744v1
2017
Quoc Khanh Doan, Marc Vandeputte, Béatrice Chatain, Pierrick Haffray, Alain Vergnet, et al.. Genetic variation of resistance to Viral Nervous Necrosis and genetic correlations with production traits in wild populations of the European sea bass (Dicentrarchus labrax). Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. https://hal.inrae.fr/hal-03156682v1
2017
François Allal, Sebastien Ferrari, Khaled Horri, Alain Vergnet, David Benhaïm, et al.. Heritability of boldness and hypoxia avoidance in European seabass, Dicentrarchus labrax. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. https://hal.inrae.fr/hal-03156670v1
2017
Marc Vandeputte, Mathieu Besson, François Allal, Florence Phocas, Edwige Quillet. Selective breeding to reduce the ecological footprint of aquaculture. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. . https://hal.inrae.fr/hal-03156701v1
2017
Marc Vandeputte, John Bostock. AQUAEXCEL2020 : an open European network of aquaculture research infrastructures. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. https://hal.inrae.fr/hal-03156690v1
2017
Mathieu Besson, Hans Komen, Gus Rose, Edwige Quillet, Johan A. M. van Arendonk, et al.. Using the right breeding objective can decrease environmental impacts and increase farm profit of sea cage farming with different quota restrictions. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. https://hal.inrae.fr/hal-03155415v1
2017
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. A medium-throughput method to phenotype fish for individual feed efficiency. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. . https://hal.inrae.fr/hal-03155407v1
2017
Marc Vandeputte. L'élevage piscicole (de précision). Communication à l'Académie d'Agriculture de France, Oct 2017, Paris, France. https://hal.inrae.fr/hal-03155401v1
2017
François Allal, Quoc Khanh Doan, Béatrice Chatain, Pierrick Haffray, Alain Vergnet, et al.. Genetic variation of resistance to Viral Nervous Necrosis in wild populations of the European sea bass (Dicentrarchus labrax). XVI Congreso nacional de Aquaculture, Oct 2017, Zaragoza, Spain. https://hal.inrae.fr/hal-03155395v1
2017
Marc Vandeputte. AQUAEXCEL and AQUAEXCEL2020: Research infrastructures projects for the benefit of European aquaculture. CRB Anim International seminar, May 2017, Paris, France. https://hal.inrae.fr/hal-03155388v1
2017
Marc Vandeputte, Clémence Fraslin, Jérôme Bugeon, François Allal, Antonio Puledda, et al.. Peut-on sélectionner sur le rendement de filet chez les poissons ? (et chez le bar en particulier). Journée du SFAMN (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2017, Montpellier, France. https://hal.inrae.fr/hal-03155369v1
2017
Mathieu Besson, Béatrice Chatain, Alain Vergnet, Frédéric Clota, Sebastien Ferrari, et al.. Sélectionner sur l’efficacité alimentaire : une nouvelle approche chez le bar. Journée du SFAMN, Mar 2017, Montpellier, France. https://hal.inrae.fr/hal-03155384v1
2017
François Allal, Pierrick Haffray, Marc Vandeputte. La sélection génomique chez les poissons marins, pour quoi faire ?. Journée du SFAMN (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2017, Montpellier, France. https://hal.inrae.fr/hal-03155373v1
2017
Marc Vandeputte. Selective breeding for better farmed fish: how to be more efficient ?. AQUAFARM, Jan 2017, Pordenone, Italy. https://hal.inrae.fr/hal-03155356v1
2016
Martin Prchal, Antti Kause, Anna K. Sonesson, Marc Vandeputte, Hana K. Kroupová, et al.. Estimation of genetic parameters of some quantitative traits in one-year common carp. Aquaculture Europe 2016, Sep 2016, Edinburgh, United Kingdom. . https://hal.inrae.fr/hal-03155316v1
2016
Christos Palaiokostas, Sophie Cariou, Anastasia Bestin, Jean-Sébastien Bruant, Pierrick Haffray, et al.. Investigation of genetic resistance to Viral Nervous Necrosis in European sea bass (Dicentrarchus labrax) using RAD sequencing. Aquaculture Europe 2016, Sep 2016, Edinburgh, United Kingdom. https://hal.inrae.fr/hal-03155244v1
2016
Sebastien Ferrari, Alain Vergnet, Frédéric Clota, Béatrice Chatain, François Allal, et al.. Mesurer l’efficacité alimentaire individuelle chez le bar ?. 5emes Journées Recherche Filière Piscicole, Jul 2016, Paris, France. . https://hal.inrae.fr/hal-03154832v1
2016
Marc Vandeputte, Béatrice Chatain, Pierrick Haffray, Edwige Quillet. La sélection génétique : un outil pour diminuer l’empreinte écologique de la pisciculture. 5emes Journées Recherche Filière Piscicole, Jul 2016, Paris, France. https://hal.inrae.fr/hal-03154837v1
2016
Anne-Sophie Tyran, Alexandre Desgranges, Anastasia Bestin, Florian Enez, François Allal, et al.. Résistance génétique à l'entérite chez la truite ? Interaction avec la flavobactériose et les caractères de production. 5. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2016, Paris, France. https://hal.inrae.fr/hal-02743196v1
2016
Dofungo Ouatarra, Anastasia Bestin, Pierrick Haffray, Florian Enez, Sophie Cariou, et al.. Utilisation d'imagerie et d'ultrasons pour l'amélioration du rendement en chair par sélection génétique de la daurade. 5. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2016, Paris, France. pp.30. https://hal.inrae.fr/hal-02741919v1
2015
Quoc Khanh Doan, Marc Vandeputte, Béatrice Chatain, Alain Vergnet, François Allal. Combining VITASSIGN and COLONY : an efficient practical procedure for parental assignment with missing parents. ISGA XII, Jun 2015, Santiago de Compostela, Spain. https://hal.science/hal-01535335v1
2015
Marc Vandeputte, Khaled Horri, François Allal, Sebastien Ferrari, Marie-Odile Vidal, et al.. Does early growth play a role in the sex determination of european seabass dicentrarchus labrax?. 12th International Symposium on Genetics in Aquaculture (ISGA), Jun 2015, Santiago de Compostela, Spain. pp.1. https://hal.inrae.fr/hal-02735070v1
2015
Pierrick Haffray, Ivonne Acosta Alba, Sophie Cariou, J.S. Bruant, Jérôme Bugeon, et al.. Can selective breeding for growth or fillet yield decrease environmental impact of fish farming? a gilthead sea bream (Sparus aurata) case study. 12. International Symposium on Genetics in Aquaculture, Jun 2015, Santiago de Compostela, Spain. https://hal.science/hal-01194132v1
2015
Jasmien Hillen, A. Carr, B. Hellemans, R. Ogden, John B. Taggart, et al.. Estimates of genetic variability and inbreeding in selected populations of European sea bass. 12. International Symposium on Genetics in Aquaculture, Jun 2015, Santiago de Compostela, Spain. https://hal.inrae.fr/hal-02735139v1
109 article(s)
2025
Damien Crestel, Alain Vergnet, Frédéric Clota, Marie-Odile Blanc, Théo Navarro, et al.. Do European Seabass Larvae Grow Better in Their Natural Temperature Regime?. Evolutionary Applications, 2025, 18 (2), pp.e70083. https://hal.science/hal-05028547v1
2025
François Allal, Mathieu Besson, Emilie Delpuech, Chloé Barrier-Loiseau, Alain Vergnet, et al.. Corrigendum to “Genomic selection for individual feed efficiency in the European seabass: Response to selection on efficiency, commercial traits and sex” [Aquaculture Volume 595, Part 2, 30 January 2025, 741682].. Aquaculture, 2025, 605, pp.742499. https://hal.inrae.fr/hal-05051395v1
2025
François Allal, Mathieu Besson, Emilie Delpuech, Chloé Barrier-Loiseau, Alain Vergnet, et al.. Genomic selection for individual feed efficiency in the European seabass: Response to selection on efficiency, commercial traits and sex. Aquaculture, 2025, 595, pp.741682. https://hal.umontpellier.fr/hal-04754459v1
2024
Maeva Leitwein, G Durif, E Delpuech, P Gagnaire, B Ernande, et al.. The fate of a polygenic phenotype within the genomic landscapes of introgression in the European seabass hybrid zone. Molecular Biology and Evolution, 2024, 41 (9), pp.msae194. https://hal.umontpellier.fr/hal-04705605v1
2024
Frédéric Clota, Alexander Goikoetxea, Alain Vergnet, Marie-Odile Blanc, Stéphane Lallement, et al.. Post-larval exposure to warm temperature enhances female ratio, while starvation and photoperiod do not: The case of European seabass, Dicentrarchus labrax. Aquaculture, 2024, 586, pp.740758. https://hal.inrae.fr/hal-04517161v1
2024
Julien Roche, Ronan Griot, François Allal, Mathieu Besson, Pierrick Haffray, et al.. APIS: an updated parentage assignment software managing triploids induced from diploid parents. G3, 2024, 14 (8), https://hal.science/hal-04649084v1
2024
Laurianne Canario, Nicolas Bédère, Marc Vandeputte, Didier Boichard, Jérôme Raoul, et al.. Quelles génétiques pour les systèmes d’élevages certifiés en agriculture biologique ?. INRAE Productions Animales, 2024, 37 (2), pp.8177. https://hal.inrae.fr/hal-04703177v1
2024
Julien Roche, Mathieu Besson, François Allal, Pierrick Haffray, Pierre Patrice, et al.. GenoTriplo: A SNP genotype calling method for triploids. PLoS Computational Biology, 2024, 20 (9), pp.e1012483. https://hal.science/hal-04754946v1
2024
Oswaldo Tovar-Bohórquez, David McKenzie, Damien Crestel, Marc Vandeputte, Benjamin Geffroy. Thermal modulation of energy allocation during sex determination in the European sea bass (Dicentrarchus labrax). Gene, 2024, 927, pp.148721. https://hal.science/hal-04645484v1
2023
Julie Nati, Felipe Blasco, Charles Rodde, Alain Vergnet, François Allal, et al.. In a marine teleost, the significance of oxygen supply for acute thermal tolerance depends upon the context and the endpoint used. Journal of Experimental Biology, 2023, 226 (11), pp.jeb245210. https://hal.umontpellier.fr/hal-04100080v1
2023
Emilie Delpuech, Marc Vandeputte, Romain Morvezen, Anastasia Bestin, Mathieu Besson, et al.. Whole‐genome sequencing identifies interferon-induced protein IFI6/IFI27-like as a strong candidate gene for VNN resistance in European sea bass. Genetics Selection Evolution, 2023, 55, pp.30. https://hal.inrae.fr/hal-04116035v1
2023
Josep Calduch-Giner, Enrique Rosell-Moll, Mathieu Besson, Alain Vergnet, Jean-Sébastien Bruant, et al.. Changes in transcriptomic and behavioural traits in activity and ventilation rates associated with divergent individual feed efficiency in gilthead sea bream (Sparus aurata). Aquaculture Reports, 2023, 29, pp.101476. https://hal.umontpellier.fr/hal-03948385v1
2023
Marc Vandeputte. Novel traits and methods for selective breeding in aquaculture. AQUACULTURE REPORTS, 2023, 33, https://hal.umontpellier.fr/hal-04935203v1
2023
Etienne Verrier, Fantine Badeau, Benjamin Basso, Christine Bertrand, Pierre Boudry P, et al.. Les races locales menacées d’abandon en France : actualisation des listes et extension de la démarche à de nouvelles espèces. Ethnozootechnie, 2023, 112, pp.93. https://hal.inrae.fr/hal-04077969v1
2022
Alexander Goikoetxea, Arianna Servili, Camille Houdelet, Olivier Mouchel, Sophie Hermet, et al.. Natural cortisol production is not linked to the sexual fate of European sea bass. Fish Physiology and Biochemistry, 2022, 48 (4), pp.1117-1135. https://hal.umontpellier.fr/hal-03773801v1
2022
Hugues de Verdal, Pierrick Haffray, Vincent Douchet, Marc Vandeputte. Impact of a divergent selective breeding programme on individual feed conversion ratio in Nile tilapia Oreochromis niloticus measured in groups by video-recording. Aquaculture, 2022, 548, https://hal.inrae.fr/hal-03512072v1
2022
Mathieu Besson, Nicky Rombout, Germain Salou, Alain Vergnet, Sophie Cariou, et al.. Potential for genomic selection on feed efficiency in gilthead sea bream (Sparus aurata), based on individual feed conversion ratio, carcass and lipid traits. Aquaculture Reports, 2022, 24, https://hal.umontpellier.fr/hal-03679214v1
2022
Marc Vandeputte, Geneviève Corraze, Jérôme Doerflinger, Florian Enez, Frédéric Clota, et al.. Realised genetic gains on growth, survival, feed conversion ratio and quality traits after ten generations of multi-trait selection in rainbow trout Oncorhynchus mykiss, fed a standard diet or a “future” fish-free and soy-free diet. Aquaculture Reports, 2022, 27, pp.101363. https://hal.inrae.fr/hal-03812229v1
2021
Benjamin Geffroy, Mathieu Besson, Núria Sánchez-Baizán, Frédéric Clota, Alexander Goikoetxea, et al.. Unraveling the genotype by environment interaction in a thermosensitive fish with a polygenic sex determination system. Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (50), pp.e2112660118. https://hal.inrae.fr/hal-03485506v1
2021
Benjamin Geffroy, Manuel Gesto, Frédéric Clota, Johan Aerts, Maria J. Darias, et al.. Parental selection for growth and early-life low stocking density increase the female-to-male ratio in European sea bass. Scientific Reports, 2021, 11 (1), https://hal.inrae.fr/hal-03360565v1
2021
Jinfeng Zhao, Martin Prchal, Antti Kause, Marc Vandeputte, David Gela, et al.. The role of energy reserves in common carp performance inferred from phenotypic and genetic parameters. Aquaculture, 2021, 541, pp.736799. https://hal.inrae.fr/hal-03360569v1
2021
Ronan Griot, François Allal, Florence Phocas, Sophie Brard-Fudulea, Romain Morvezen, et al.. Optimization of Genomic Selection to Improve Disease Resistance in Two Marine Fishes, the European Sea Bass (Dicentrarchus labrax) and the Gilthead Sea Bream (Sparus aurata). Frontiers in Genetics, 2021, 12, pp.665920. https://hal.inrae.fr/hal-03360561v1
2021
Charles Rodde, Hugues de Verdal, Marc Vandeputte, François Allal, Julie Nati, et al.. An investigation of links between metabolic rate and feed efficiency in European sea bass Dicentrarchus labrax. Journal of Animal Science, 2021, 99 (6), pp.1-9. https://hal.inrae.fr/hal-03360566v1
2021
Sara Faggion, Marc Vandeputte, Alain Vergnet, Frédéric Clota, Marie-Odile Blanc, et al.. Sex dimorphism in European sea bass (Dicentrarchus labrax L.): New insights into sex-related growth patterns during very early life stages. PLoS ONE, 2021, 16 (4), pp.e0239791. https://hal.inrae.fr/hal-03206637v1
2021
Sofie Barsøe, François Allal, Alain Vergnet, Marc Vandeputte, Niels Jørgen Olesen, et al.. Different survival of three populations of European sea bass (Dicentrarchus labrax) following challenge with two variants of nervous necrosis virus (NNV). Aquaculture Reports, 2021, 19, pp.100621. https://hal.inrae.fr/hal-03150815v1
2021
Charles Rodde, Marc Vandeputte, Trong Quoc Trinh, Vincent Douchet, Marc Canonne, et al.. The Effects of Feed Restriction and Isolated or Group Rearing on the Measurement of Individual Feed Intake and Estimation of Feed Conversion Ratio in Juvenile Nile Tilapia (Oreochromis niloticus) for Selective Breeding Purposes. Frontiers in Genetics, 2021, 11, https://hal.inrae.fr/hal-03150862v1
2021
Anastasia Bestin, Olivier Brunel, Arnaud Malledant, Bastien Debeuf, Philippe Benoit, et al.. Genetic parameters of caviar yield, color, size and firmness using parentage assignment in an octoploid fish species, the Siberian sturgeon Acipenser baerii. Aquaculture, 2021, 540, pp.1-7. https://hal.inrae.fr/hal-03198203v1
2021
Pierre Boudry, François Allal, Muhammad L. Aslam, Luca Bargelloni, Tim P. Bean, et al.. Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries. Aquaculture Reports, 2021, 20, pp.100700. https://hal.umontpellier.fr/hal-03411084v1
2021
Marc Vandeputte, Anastasia Bestin, Louarn Fauchet, Jean-Michel Allamellou, Stéphane Bosc, et al.. Can we identify wild-born salmon from parentage assignment data? A case study in the Garonne-Dordogne rivers salmon restoration programme in France. Aquatic Living Resources, 2021, 34, pp.1-10. https://hal.inrae.fr/hal-03188874v1
2021
Ronan Griot, François Allal, Florence Phocas, Sophie Brard-Fudulea, Romain Morvezen, et al.. Genome-wide association studies for resistance to viral nervous necrosis in three populations of European sea bass (Dicentrarchus labrax) using a novel 57k SNP array DlabChip. Aquaculture, 2021, 530, pp.735930. https://hal.inrae.fr/hal-03544239v1
2020
Charles Rodde, Hugues de Verdal, Sébastien Lefebvre, Christophe Menniti, Marc Vandeputte, et al.. Variations in isotope incorporation rates and trophic discrimination factors of carbon and nitrogen stable isotopes in scales from three European sea bass (Dicentrarchus labrax) populations. Journal of Experimental Marine Biology and Ecology, 2020, 533, pp.151468. https://hal.science/hal-03097301v1
2020
Marc Vandeputte, Frédéric Clota, Bastien Sadoul, Marie‐odile Blanc, Eva Blondeau‐bidet, et al.. Low temperature has opposite effects on sex determination in a marine fish at the larval/postlarval and juvenile stages. Ecology and Evolution, 2020, 10 (24), pp.13825-13835. https://hal.inrae.fr/hal-03150869v1
2020
Charles Rodde, Marc Vandeputte, François Allal, Mathieu Besson, Frédéric Clota, et al.. Population, Temperature and Feeding Rate Effects on Individual Feed Efficiency in European Sea Bass (Dicentrarchus labrax). Frontiers in Marine Science, 2020, 7, https://hal.inrae.fr/hal-03150873v1
2020
Charles Rodde, Béatrice Chatain, Marc Vandeputte, Trong Quoc Trinh, John A.H. Benzie, et al.. Can individual feed conversion ratio at commercial size be predicted from juvenile performance in individually reared Nile tilapia Oreochromis niloticus?. Aquaculture Reports, 2020, 17, pp.100349. https://hal.inrae.fr/hal-03150877v1
2020
Simon Mackenzie, Arjan Palstra, Josep Planas, David J Mckenzie, Marie‐laure Bégout, et al.. Aerobic swimming in intensive finfish aquaculture: applications for production, mitigation and selection. Reviews in Aquaculture, 2020, 13 (1), pp.138-155. https://hal.science/hal-03097375v1
2020
Sara Faggion, Pierre Sanchez, Marc Vandeputte, Frédéric Clota, Alain Vergnet, et al.. Evaluation of a European sea bass (Dicentrarchus labrax L.) post-larval tagging method with ultra-small RFID tags. Aquaculture, 2020, 520, pp.734945. https://hal.inrae.fr/hal-03150884v1
2020
Marc Vandeputte, Clémence Fraslin, Pierrick Haffray, Anastasia Bestin, François Allal, et al.. How to genetically increase fillet yield in fish: Relevant genetic parameters and methods to predict genetic gain. Aquaculture, 2020, 519, pp.734877. https://hal.inrae.fr/hal-03150887v1
2019
Hugues de Verdal, Catherine Maeve O'Connell, Wagdy Mekkawy, Marc Vandeputte, Béatrice Chatain, et al.. Agonistic behaviour and feed efficiency in juvenile Nile tilapia Oreochromis niloticus. Aquaculture, 2019, 505, pp.271-279. https://hal.umontpellier.fr/hal-02384770v1
2019
Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Jean-Michel Allamellou, et al.. First evidence of realized selection response on fillet yield in Rainbow trout Oncorhynchus mykiss, Using Sib selection or based on correlated ultrasound measurements. Frontiers in Genetics, 2019, 10, pp.1-13. https://hal.inrae.fr/hal-02627462v1
2019
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Combining Individual Phenotypes of Feed Intake With Genomic Data to Improve Feed Efficiency in Sea Bass. Frontiers in Genetics, 2019, 10, pp.1-14. https://hal.science/hal-02403255v1
2019
Ronan Griot, Francois Allal, Sophie Brard-Fudulea, Romain Morvezen, Pierrick Haffray, et al.. APIS: An auto-adaptive parentage inference software that tolerates missing parents. Molecular Ecology Resources, 2019, pp.1-12. https://hal.science/hal-02434174v1
2019
Marc Vandeputte, P.-A. Gagnaire, F. Allal. The European sea bass: a key marine fish model in the wild and in aquaculture. Animal Genetics, 2019, 50 (3), pp.195-206. https://hal.science/hal-02395941v1
2019
Sara Faggion, Marc Vandeputte, Béatrice Chatain, Pierre-Alexandre Gagnaire, François Allal. Population-specific variations of the genetic architecture of sex determination in wild European sea bass Dicentrarchus labrax L.. Heredity, 2019, 122 (5), pp.612-621. https://hal.science/hal-02395931v1
2018
Christos Palaiokostas, Sophie Cariou, Anastasia Bestin, Jean-Sebastien Bruant, Pierrick Haffray, et al.. Genome-wide association and genomic prediction of resistance to viral nervous necrosis in European sea bass (Dicentrarchus labrax) using RAD sequencing. Genetics Selection Evolution, 2018, 50 (1), pp.1-11. https://hal.science/hal-01826622v1
2018
Dafni Anastasiadi, Marc Vandeputte, Nuria Sanchez-Baizan, Francois Allal, Francesc Piferrer. Dynamic epimarks in sex-related genes predict gonad phenotype in the European sea bass, a fish with mixed genetic and environmental sex determination. Epigenetics, 2018, 13 (9), pp.988-1011. https://hal.science/hal-01994184v1
2017
J.E.J. Hillen, I. Coscia, Marc Vandeputte, K. Herten, B. Hellemans, et al.. Estimates of genetic variability and inbreeding in experimentally selected populations of European sea bass. Aquaculture, 2017, 479, pp.742-749. https://hal.science/hal-01583182v1
2017
Hugues de Verdal, Wagdy Mekkawy, Curtis E. Lind, Marc Vandeputte, Beatrice Chatain, et al.. Measuring individual feed efficiency and its correlations with performance traits in Nile tilapia, Oreochromis niloticus. Aquaculture, 2017, 468, Part A, pp.489-495. https://hal.science/hal-01530809v1
2017
Marc Vandeputte, Antonio Puledda, Anne Sophie Tyran, Anastasia Bestin, Céline Coulombet, et al.. Investigation of morphological predictors of fillet and carcass yield in European sea bass (Dicentrarchus labrax) for application in selective breeding. Aquaculture, 2017, 470, pp.40-49. https://hal.science/hal-01595276v1
2017
Bruno Guinand, Marc Vandeputte, Mathilde Dupont-Nivet, Alain Vergnet, Pierrick Haffray, et al.. Metapopulation patterns of additive and nonadditive genetic variance in the sea bass (Dicentrarchus labrax). Ecology and Evolution, 2017, 7 (8), pp.2777-2790. https://hal.science/hal-01606597v1
2017
Hugues de Verdal, Hans Komen, Edwige Quillet, Béatrice Chatain, François Allal, et al.. Improving feed efficiency in fish using selective breeding: a review. Reviews in Aquaculture, 2017, 10 (4), pp.1-19. https://hal.science/hal-01602277v1
2017
Q.K. Doan, Marc Vandeputte, B. Chatain, Thierry Morin, F. Allal. Viral encephalopathy and retinopathy in aquaculture: a review. Journal of Fish Diseases, 2017, 40 (5), pp.717-742. https://hal.science/hal-01533903v1
2016
Jean-Noël Hubert, François Allal, Caroline Hervet, Monique Ravakarivelo, Zsigmond Jeney, et al.. How could fully scaled carps appear in natural waters in Madagascar?. Proceedings of the Royal Society B: Biological Sciences, 2016, 283 (1837), pp.1-8. https://hal.umontpellier.fr/hal-01924181v1
2016
Marc Vandeputte, J.D. Porte, Benoît Aupérin, Mathilde Dupont-Nivet, A. Vergnet, et al.. Quantitative genetic variation for post-stress cortisol and swimming performance in growth-selected and control populations of European sea bass (Dicentrarchus labrax). Aquaculture, 2016, 455, pp.1-7. https://hal.science/hal-01259738v1
2016
Sebastien Ferrari, Khaled Horri, François Allal, Alain Vergnet, David Benhaim, et al.. Heritability of boldness and hypoxia avoidance in European seabass, Dicentrarchus labrax. PLoS ONE, 2016, 11 (12), pp.1-16. https://hal.science/hal-01602254v1
2015
Christos Palaiokostas, Michaël Bekaert, John B. Taggart, Karim Gharbi, Brendan J. Mcandrew, et al.. A new SNP-based vision of the genetics of sex determination in European sea bass (Dicentrarchus labrax). Genetics Selection Evolution, 2015, 47 (1), pp.68. https://hal.science/hal-01341305v1
2015
C. Costa, Marc Vandeputte, F. Antonucci, C. Boglione, H. de Verdal, et al.. Are trunk lateral line anomalies and disoriented scale patterns in European seabass (Dicentrarchus labrax) influenced by genetics?. Aquaculture, 2015, 448, pp.38-43. https://hal.science/hal-01535291v1
56 article(s)
Autres publications
2024
Théo Navarro, Tallulah Bailey, Damien Crestel, Alain Vergnet, Aurelien Lledo, et al.. Using Swimming Respirometry to Investigate the Thermal Physiology of European Seabass Populations. American Fisheries Society annual congress, Sep 2024, Honololu, United States. https://hal.science/hal-04732751v1
2024
Sarah Nahon, Gatien Debailleul, François Allal, Marc Vandeputte, Christophe Menniti, et al.. Carbon and nitrogen stable isotopes: Is it a good proxy of individual efficiency in seabass (Dicentrarchus labrax)?. AQUA2024, Aug 2024, Copenaghe, Denmark. https://hal.science/hal-04725151v1
2024
Debailleul Gatien, Nahon Sarah, Allal François, Vandeputte Marc, Vergnet Alain. BarIsOTop : Peut-on utiliser les isotopes stables du carbone et de l’azote pour prédire l’efficacité alimentaire chez le bar (Dicentrarchus labrax). 8ème Journées de la Recherche Filière Piscicole, Jul 2024, Rennes, France. https://hal.science/hal-04725115v1
2024
Théo Navarro, Damien Crestel, Alain Vergnet, Martin Debatis, Amy-Jo Randalls, et al.. Impacts of Heatwaves and Hypoxia on European seabass Dicentrarchus labrax Reared in Three Thermal Regimes. Society for Experimental Biology annual conference, Jul 2024, Pragues, République tchèque. https://hal.inrae.fr/hal-04732617v1
2014
Jonathan D’ambrosio, Romain Morvezen, Florence Phocas, François Allal, Marc Vandeputte, et al.. 2014-2024 : MISE EN PLACE ET EVOLUTION DE LA SÉLECTION GÉNOMIQUE DANS LA FILIÈRE AQUACOLE FRANÇAISE. Journées de la Recherche Filière Piscicole, ITAVI, Jul 2024, Rennes, France. https://hal.science/hal-04796774v1
2024
Gatien Debailleul, Sarah Nahon, François Allal, Marc Vandeputte, Alain Vergnet. BarIsOTop : Existe-t-il une corrélation entre l’efficacité alimentaire et les isotopes stables du carbone et de l’azote chez le bar Dicentrarchus labrax ?. Journée de la Societé Française d'Aquaculture Marine, Mar 2024, Montpellier, France. https://hal.science/hal-04725138v1
2023
Julien Roche, Mathieu Besson, Pierre Patrice, Pierrick Haffray, François Allal, et al.. Génotypage de triploïdes à partir de puces à ADN et Assignation de parenté. Journées Techniques Interfilières SYSAAF, Oct 2023, Rennes, France. https://hal.inrae.fr/hal-04251343v1
2023
Damien Crestel, Alain Vergnet, Frédéric Clota, Marie-Odile Blanc, Stéphane Lallement, et al.. Larval growth and differential survival in three natural populations of European seabass (Dicentrarchus labrax) exposed to four thermal regimes. Aquaculture Europe 2023, Sep 2023, Wien, Austria. https://hal.science/hal-04185974v1
2023
Mathieu Besson, Julien Roche, Pierre Patrice, Pierrick Haffray, François Allal, et al.. AN R-BASED PIPELINE FOR GENOTYPE CALLING AND PARENTAGE ASSIGNMENT OF TRIPLOID OFFSPRING TO THEIR DIPLOID PARENTS. Aquaculture Europe 2023, Sep 2023, Vienne, Austria. https://hal.inrae.fr/hal-04385840v1
2023
M Oswaldo Tovar Bohórquez, Damien Crestel, Marc Vandeputte, Arianna Servili, Benjamin Geffroy. Temperature driven growth impairment is differentially mediated by ghrelin during the early development of Dicentrarchus labrax. Inside Out: New Frontiers in the Comparative Physiology of the Vertebrate Gut, Jun 2023, Eastwell Manor, Kent, United Kingdom. https://hal.science/hal-04185958v1
2023
Marc Vandeputte. Breeding plans for disease resistance in Mediterranean species. XXVII Convegno Nazionale Società Italiana di Patologia Ittica, Jun 2023, Gênes, Italy. https://hal.science/hal-04185986v1
2023
Marc Vandeputte. Successful genetic improvement of feed efficiency in seabass by alternative methods. NMBU Genetics and Breeding Seminars, May 2023, As, Norway. https://hal.science/hal-04185991v1
2023
Benjamin Geffroy, Mathieu Besson, Núria Sánchez-Baizán, Frédéric Clota, Alexander Goikoetxea, et al.. Genotype by environment interaction explain sex determination in the European Seabass. 12th International Symposium on Reproductive Physiology of Fish, May 2023, Hersonisos - Crète, Greece. https://hal.science/hal-04185947v1
2023
Faten Jaouahdou, Florian Enez, Christophe Eklouh-Molinier, Jérôme Doerflinger, Guylaine Collewet, et al.. Phenomic selection, an alternative to genomic selection in animal breeding?. Workshop spectroscopie et microscopie du milieu marin, Feb 2023, Brest, France. https://hal.inrae.fr/hal-04185933v1
2023
Benjamin B. Basso, Christine Bertrand, Pierre Boudry, Bertrand Bouffartigue, Eleonore Charvolin-Lemaire, et al.. Étude concernant l’actualisation, la définition et les exemples de valorisation des races locales, rustiques, menacées\r\nVolet 1 -Races menacées - Actualisation des listes de races menacées - Extension de la réflexion aux abeilles et aux espèces aquacoles. Inrae. 2023. https://hal.inrae.fr/hal-04488379v1
2022
Jonathan D’ambrosio, Anastasia Bestin, Mathieu Besson, Romain Morvezen, Aline Bajek, et al.. Efficiency of genomic selection by imputation in sea bass and sea bream to improve processing traits and resistance to Viral Nervous Necrosis. XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. https://hal.inrae.fr/hal-04185895v1
2022
Marc Vandeputte, Geneviève Corraze, Jérôme Doerflinger, Florian Enez, Frédéric Clota, et al.. Effect of 10 generations of selection on growth, feed efficiency, processing and lipid traits in rainbow trout fed a standard or a \"future\" fish-free, soy-free diet. International Symposium on Genetics In Aquaculture 2022, Nov 2022, Puerto Varas, Chile. https://hal.inrae.fr/hal-04178939v1
2022
Emilie Delpuech, Marc Vandeputte, Romain Morvezen, Anastasia Bestin, Mathieu Besson, et al.. IFI6, an interferon alpha induced protein, identified by whole genome sequencing as involved in Viral Nervous Necrosis resistance in European sea bass (Dicentrarchus labrax). International Symposium on Genetics in Aquaculture XIV, Nov 2022, Puerto Varas, Chile. https://hal.inrae.fr/hal-04185918v1
2022
Anastasia Bestin, Jonathan D’ambrosio, Mathieu Besson, F Massieu, Alain Vergnet, et al.. Can genomics improve the selection efficiency of sea bream (Sparus aurata) candidates reared in sanitary protected RAS when GxE exist with the production environment in open-sea cages?. XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. https://hal.inrae.fr/hal-04185868v1
2022
Faten Jaouahdou, Florian Enez, Christophe Eklouh-Molinier, Jérôme Doerflinger, Guylaine Collewet, et al.. Phenomic selection, an alternative to genomic selection in animal breeding?. International Symposium on Genetics in Aquaculture XIV, Nov 2022, Puerto Varas, Chile. https://hal.inrae.fr/hal-04185835v1
2022
Jonathan D’ambrosio, Tarek Chalioui, Jean Ruche, Alexandre Desgranges, Marc Vandeputte, et al.. Interest of artificial intelligence to predict fillet yield in rainbow trout. XIV. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. https://hal.science/hal-04185903v1
2022
Alain Vergnet, Marc Vandeputte, Jean-Jacques Lareyre, François Allal. Germ stem cell grafting in european sea bass: a practical approach. Aquaculture Europe 2022, Sep 2022, Rimini, Italy. https://hal.inrae.fr/hal-03911893v1
2022
Marc Vandeputte, Frédéric Clota, Alain Vergnet, Marie-Odile Blanc, Stéphane Lallement, et al.. Can we combine genetics and a two-step temperature control to move towards monosex European seabass Dicentrarchus labrax?. Aquaculture Europe 2022, Sep 2022, Rimini, Italy. https://hal.inrae.fr/hal-04185712v1
2022
Emilie Delpuech, Marc Vandeputte, Florence Phocas, Anastasia Bestin, Mathieu Besson, et al.. Fine mapping for Viral Nervous Necrosis resistance in European sea bass (Dicentrarchus labrax) identified by whole genome sequencing. Aquaculture Europe 2022, Sep 2022, Rimini, Italy. https://hal.inrae.fr/hal-04185721v1
2022
François Allal, Mathieu Besson, Alain Vergnet, David J Mckenzie, Frédéric Clota, et al.. Improving feed efficiency in fish: let’s get down to business. Aquaculture Europe 2022, Sep 2022, Rimini, Italy. https://hal.inrae.fr/hal-04185734v1
2022
Emilie Delpuech, Marc Vandeputte, Florence Phocas, Yoannah François, Anastasia Bestin, et al.. Cartographie fine de la résistance à la nécrose nerveuse virale chez le bar identifiée par séquençage du génome entier. 7èmes Journées Recherche Filière Piscicole, Jul 2022, Paris, France. https://hal.inrae.fr/hal-04185459v1
2022
Jonathan D’ambrosio, Mathieu Besson, Anastasia Bestin, Jean-Sébastien Bruant, Aline Bajek, et al.. Réduction du coût de la sélection génomique par utilisation de panels à plus faible densité de marqueurs chez le bar et la daurade. 7. Journées de la Recherche Piscicole, Jul 2022, Paris, France. https://anses.hal.science/anses-03889117v1
2022
Frédéric Clota, Benjamin Geffroy, Alain Vergnet, Marie-Odile Blanc, François Ruelle, et al.. Les hautes températures en phase juvénile favorisent la croissance et la différenciation femelle du bar (Dicentrarchus labrax L.). 7émes Journées Recherche Filière Piscicole, Jul 2022, Paris, France. https://hal.science/hal-04185410v1
2022
Marc Vandeputte. AQUAEXCEL3.0 : une opportunité pour nouer des collaborations à l’étranger en R&D aquacole. 7èmes Journées recherche Filière Piscicole, Jul 2022, Paris, France. https://hal.science/hal-04185430v1
2022
Marc Vandeputte, Geneviève Corraze, Jérôme Doerflinger, Florian Enez, Frédéric Clota, et al.. Evolution des performances de la truite arc-en-ciel après 10 générations de sélection et réponse à un aliment standard ou « futur » sans produits de poisson ni soja. 7èmes Journées Recherche Filière Piscicole, Jul 2022, Paris, France. https://hal.inrae.fr/hal-04185413v1
2022
Damien Crestel, Alain Vergnet, Marie-Odile Blanc, Stéphane Lallement, Frédéric Clota, et al.. Etude de la croissance larvaire chez trois populations naturelles de bar (Dicentrarchus labrax) soumises à quatre régimes thermiques. 7èmes Journées recherche Filière Piscicole, Jul 2022, Paris, France. https://hal.science/hal-04185425v1
2022
Mathieu Besson, Romain Morvezen, Anastasia Bestin, Yoannah François, Aline Bajek, et al.. Selective breeding for survival to Vibrio harveyi in European seabass ( Dicentrarchus labrax ) is robust to different feeding environments. World Congress on Genetics Applied to Livestock Production, Jul 2022, Rotterdam, Netherlands. pp.688-691, https://hal.science/hal-04185398v1
2022
Emilie Delpuech, Marc Vandeputte, Florence Phocas, Anastasia Bestin, Mathieu Besson, et al.. WHOLE GENOME SEQUENCING TO REFINE THE DETECTION OF QTL FOR VIRAL NERVOUS NECROSIS IN EUROPEAN SEA BASS (DICENTRARCHUS LABRAX). 6th symposium on Genomics in Aquaculture Symposium, May 2022, Grenade, Spain. https://hal.inrae.fr/hal-04116026v1
2022
Núria Sánchez-Baizán, J Denkena, François Allal, Maria Colome-Tatche, Marc Vandeputte, et al.. Development of epigenetic biomarkers for the European seabass (Dicentrarchus labrax). 6th Symposium on Genomics in Aquaculture, May 2022, Grenade, Spain. https://hal.inrae.fr/hal-04185380v1
2022
Maeva Leitwein, Ghislain Durif, Pierre-Alexandre Gagnaire, Alain Vergnet, Frédéric Clota, et al.. Using genome-wide ancestry pattern in European sea bass to assess phenotypic variation and ensure sustainable aquaculture. 6th Symposium on Genomics in Aquaculture, May 2022, Grenade, Spain. https://hal.inrae.fr/hal-04185352v1
2022
François Allal, Mathieu Besson, Núria Sánchez-Baizán, Frédéric Clota, Alexander Goikoetxea, et al.. Combined genomic approaches to unravel sex determination in the European seabass. 6. Symposium on Genomics in Aquaculture, May 2022, Grenade, Spain. https://hal.inrae.fr/hal-04185371v1
2021
Mathieu Besson, David J Mckenzie, Julie J.H Nati, Salou Germain, Alain Vergnet, et al.. Phenotypic and genomic correlations between feed efficiency and metabolic traits in European sea bass. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360559v1
2021
Anastasia Bestin, Mathieu Besson, Alain Vergnet, François Allal, Frédéric Clota, et al.. Genetic correlations between processing traits and individual feed efficiency in a gilthead sea bream (Sparus aurata) commercial line. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360548v1
2021
Charles Rodde, Marc Vandeputte, Trong Quoc Trinh, John A. H. Benzie, Hugues de Verdal. Predicting feed conversion ratio at commercial size from juvenile performance in individually reared Oreochromis niloticus. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360555v1
2021
Alain Vergnet, Frédéric Clota, Edoh Denis, François Ruelle, Marie-Odile Blanc, et al.. Phenotypic characterization of the three main natural populations of seabass (Dicentrarchus labrax) on growth and quality traits performances. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. . https://hal.inrae.fr/hal-03360553v1
2021
Frédéric Clota, Benjamin Geffroy, Alain Vergnet, Marie-Odile Blanc, Stéphane Lallement, et al.. Late high temperature promotes fast growth and female differentiation in European sea bass Dicentrarchus labrax, while early photoperiod has no effect on either trait. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360551v1
2021
Sara Faggion, Duranton Maud, Pierre-Alexandre Gagnaire, Marc Vandeputte, François Allal. Genomically assisted reconstruction of the ancestral Dicentrarchus labrax L. Mediterranean lineage. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360557v1
2021
François Allal, Mathieu Besson, Bastien Sadoul, François Ruelle, Pegart Mako, et al.. Genomic prediction and genotype-by-temperature interaction of sex tendency in European sea bass.. Aquaculture Europe 2021, Oct 2021, Funchal, Portugal. https://hal.inrae.fr/hal-03360554v1
2020
Anastasia Bestin, Sophie S. Cariou, Jean-Sébastien J.-S. Bruant, Marc Vandeputte, Florian Enez, et al.. Combining data from successive cohorts to increase the accuracy of estimated breeding values: a case study in a gilthead sea bream (Sparus aurata) commercial line. Aquaculture Europe 2020 online, Apr 2021, Cork, Ireland. https://hal.inrae.fr/hal-03187498v1
2020
Sara Faggion, Marc Vandeputte, Alain Vergnet, Frédéric Clota, Marie‐odile Blanc, et al.. Sex dimorphism in European sea bass (Dicentrarchus labrax L.) : new insights into sex-related growth patterns during very early life stages. Aquaculture Europe 2020 online, Apr 2021, Cork, Ireland. https://hal.inrae.fr/hal-03187478v1
2020
Marc Vandeputte, Geneviève Corraze, Jérôme Doerflinger, Florian Enez, Frédéric Clota, et al.. Evaluation of genetic gain in rainbow trout fed standard of “future” diet after 10 generations of multi-trait selection in the Aqualande selective breeding program. Aquaculture Europe 2020 Online, Apr 2021, Cork, Ireland. https://hal.inrae.fr/hal-03187469v1
2020
Ronan Griot, François Allal, Florence Phocas, Sophie Brard-Fudulea, Romain Morvezen, et al.. Genome wide association studies revealed one strong effect QTL for viral nervous necrosis resistance in European sea bass (Dicentrarchus labrax). Aquaculture Europe 2020, Apr 2021, Cork, Ireland. https://hal.inrae.fr/hal-03198222v1
2020
Marc Vandeputte, Geneviève Corraze, Florian Enez, Pierrick Haffray, Jérôme Doerflinger, et al.. Réponse à 10 générations de sélection multicaractères chez la truite chez Aqualande. Journées techniques du Sysaaf, Dec 2020, Rennes, France. https://hal.inrae.fr/hal-03187464v1
2020
Marc Vandeputte, Benjamin Geffroy. Le stress a-t-il un effet sur le sexe des bars ?. Journées techniques du Sysaaf, Dec 2020, Rennes, France. https://hal.inrae.fr/hal-03187458v1
2020
Sara Faggion, Maud Duranton, Pierre-Alexandre Gagnaire, Marc Vandeputte, François Allal. Genomically assisted reconstruction of the ancestral Dicentrarchus labrax Mediterranean lineage. 6th International Symposium Genomics in Aquaculture, Sep 2020, Granada, Spain. https://hal.inrae.fr/hal-03187502v1
2020
Nuria Sanchez-Baizan, Marc Vandeputte, François Allal, Francesc Piferrer. Multigenerational epigenetic inheritance of masculinizing temperatures in the European sea bass. 6th International Symposium Genomics in Aquaculture, Sep 2020, Granada, Spain. https://hal.inrae.fr/hal-03187504v1
2019
Marc Vandeputte, Clémence Fraslin, Pierrick Haffray, Anastasia Bestin, François Allal, et al.. How to genetically increase fillet yield in fish: relevant genetic parameters and methods for the estimation of genetic gain. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. https://hal.inrae.fr/hal-03187446v1
2019
Marc Vandeputte. Introducing AQUAEXCEL2020 and its relevance to industry. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. https://hal.inrae.fr/hal-03187455v1
2019
Charles Rodde, Marc Vandeputte, François Allal, Mathieu Besson, Alain Vergnet, et al.. Individual feed intake and body weight gain relationship according to genetic origin and rearing temperature in European sea bass Dicentrarchus labrax. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. . https://hal.inrae.fr/hal-03187449v1
2019
Daniel Montero, S. Torrecillas, Douglas R. Tocher, Marc Vandeputte, Fontanillas Ramon, et al.. Development of fish feeds and feeding strategies for genetically superior fish from breeding programmes. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. https://hal.inrae.fr/hal-03187450v1
2019
Nuria Sanchez-Baizan, Dafni Anastasiadi, Marc Vandeputte, François Allal, Francesc Piferrer. Epigenetic inheritance and integration of masculinizing temperatures of the European sea bass (Dicentrarchus labrax). Epigenetic inheritance Symposium, Aug 2019, Zurich, Switzerland. https://hal.inrae.fr/hal-03187444v1
2019
Hugues de Verdal, Charles Rodde, Marc Cannone, Marc Vandeputte, Pierrick Haffray. Possibilité d’amélioration génétique de l’efficacité alimentaire chez le tilapia du Nil – projet DADA-EAT. 6emes Journées Recheche Filière Piscicole, Jul 2019, Paris, France. https://hal.inrae.fr/hal-03187441v1
2019
Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Jean-Michel Allamelou, et al.. Réponse à la sélection sur le rendement de filet chez la truite arc-en-ciel. 6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France. https://hal.inrae.fr/hal-02734410v1
2019
Mathieu Besson, François Allal, Alain Vergnet, Frédéric Clota, Sophie Cariou, et al.. Améliorer l'efficacité alimentaire des poissons en utilisant une nouvelle méthode de phénotypage en aquarium individuel. 6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France. https://hal.science/hal-02264927v1
2019
Mathieu Besson, Marc Vandeputte, François Allal, Patrick Prunet, Marie-Laure Bégout, et al.. Accounting for genetic variability in fitness-related traits using a Dynamic Energy Budget model, an example on European Seabass. 6. International Symposium and Thematic School on ‘Dynamic energy Budget theory for metabolic organization’ (DEB2019), Apr 2019, Brest, France. pp.47. https://hal.inrae.fr/hal-03187437v1
2019
Marc Vandeputte, Pierrick Haffray, Anastasia Bestin, François Allal, Mathilde Dupont-Nivet. Interaction génotype x aliment: que sait-on, où va-t-on ?. Journée du SFAM, Mar 2019, Montpellier, France. https://hal.inrae.fr/hal-03187439v1
2018
Marc Vandeputte, Francesc Piferrer. Genetic and Environmental Components of Sex Determination in the European Sea Bass. Sex Control in Aquaculture, John Wiley & Sons, Ltd, pp.305-325, 2018, 978-1-119-12728-4. https://hal.inrae.fr/hal-03150926v1
2018
Hugues de Verdal, Marc Vandeputte, Catherine O'Connell, Marie Laure Begout, Wagdy Mekkawy, et al.. Measuring individual feed efficiency and its correlations with performances and agonistic behaviours in juvenile Nile Tilapia Oreochromis niloticus held in groups. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187148v1
2018
François Allal, Quoc Khanh Doan, Béatrice Chatain, Alain Vergnet, Pierrick Haffray, et al.. Genome-wide association study and genomic evaluations for resistance to Viral Nervous Necrosis in wild populations of European seabass Dicentrarchus labrax. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187164v1
2018
Marc Vandeputte, François Allal, Dafni Anastasiadi, Alexandre Vasilescu, Benjamin Geffroy, et al.. Accurate genomic prediction of phenotypic sex within European sea bass families : a unique tool to understand and control sex ratio variations in a species with polygenic sex determination. AQUA 2018, Aug 2018, Montpellier, France. . https://hal.inrae.fr/hal-03187169v1
2018
François Allal, Maud Duranton, Romain Morvezen, Sophie Brard-Fudulea, Charles Poncet, et al.. Development and characterization of a 57K Single Nucleotide Polymorphism array for European sea bass. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187160v1
2018
Sara Faggion, Marc Vandeputte, Béatrice Chatain, Pierre-Alexandre Gagnaire, François Allal. Population-specific variations of the genetic architecture of sex determination in wild European sea bass Dicentrarchus labrax L.. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187154v1
2018
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Selective breeding on tolerance to fasting improves feed conversion ratio of sea bass. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187434v1
2018
Marc Vandeputte. An introduction to the AQUAEXCEL2020 Project. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187166v1
2018
Benjamin Geffroy, Marc Vandeputte, Marie‐odile Blanc, Frédéric Clota, Bastien Sadoul, et al.. Sex determination of the European sea bass : deciphering the role of temperature over the whole larval period to enhance female production. AQUA 2018, Aug 2018, Montpellier, France. https://hal.inrae.fr/hal-03187433v1
2018
Ronan Griot, François Allal, Sophie Brard-Fudulea, Sophie S. Cariou, Pierrick Haffray, et al.. APIS: A new auto-adaptive parentage inference software tolerant to missing parents. 13th International Symposium Genetics in Aquaculture, Jul 2018, Cairns, Australia. https://hal.inrae.fr/hal-03187121v1
2018
Hugues de Verdal, Marc Vandeputte, Wagdy Mekkawy, Béatrice Chatain, John A. H. Benzie. Estimation of the genetic parameters of feed efficiency in juvenile Nile Tilapia (Oreochromis niloticus) using video analyses. 13th International Symposium Genetics in Aquaculture, Jul 2018, Cairns, Australia. https://hal.inrae.fr/hal-03187106v1
2018
Romain Morvezen, Anastasia Bestin, Anne-Sophie Tiriau, Laurane Pallandre, Joelle Cabon, et al.. Heritabilities of resistance to VNN and vibriosis and genetic correlations with production traits and processing yields in two selected commercial lines of the European sea bass Dicentrarchus labrax. 13th International Symposium Genetics in Aquaculture, Jul 2018, Cairns, Australia. https://hal.inrae.fr/hal-03187102v1
2018
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Genetic improvement of feed conversion ratio in sea bass : new approach based on individual phenotypes and genomic info. Genetics and Breeding in Aquaculture: North meets South, May 2018, Bergen, Norway. https://hal.inrae.fr/hal-03156894v1
2018
François Allal, Ronan Griot, Pierre-Alexandre Gagnaire, Romain Morvezen, Sophie Brard, et al.. Des puces pour prédire l’avenir…. Journées du SFAM (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2018, Montpelllier, France. https://hal.inrae.fr/hal-03156824v1
2018
Benjamin Geffroy, Marc Vandeputte. Le sexe du bar, on en voit le bout. Journée du SFAM, Mar 2018, Montpelllier, France. https://hal.inrae.fr/hal-03156828v1
2018
Mathieu Besson, Francois Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Sélection du bar pour l’efficacité alimentaire: on y arrive. Journée du SFAM, Mar 2018, Montpellier, France. https://hal.inrae.fr/hal-03156814v1
2018
Florian Enez, Bénédicte Lorgeoux, Mahunon H, Jérôme Bugeon, Marc Vandeputte, et al.. Genetic parameters for growth and colour traits in Pacific blue shrimp Litopenaeus stylirostris in a mixed family design with SNP parentage assignement in New-Caledonia. 11. World Congress on Genetics Applied to Livestock Production, Feb 2018, Auckland, New Zealand. https://hal.inrae.fr/hal-03156790v1
2018
Christos Palaiokostas, Martin Kocour, Tomáš Veselý, Sophie Cariou, Anastasia Bestin, et al.. Breeding for disease resistance in farmed fish in the era of high-throughput sequencing. 11th World Congress on Genetics Applied to Livestock Production, Feb 2018, Auckland, New Zealand. https://hal.inrae.fr/hal-03156780v1
2018
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Estimation of genetic parameters of feed conversion ratio based on individual phenotypes in sea bass. 11th World Congress on Genetics Applied to Livestock Production, Feb 2018, Auckland, New Zealand. https://hal.inrae.fr/hal-03156802v1
2018
Bastien Sadoul, Xavier Cousin, Marc Vandeputte, Isabelle Leguen, Frédéric Clota, et al.. Thermal imprinting during embryogenesis and future adaptive capacities in European seabass. 3. International Congress on Applied Ichthyology and Aquatic Environment, 2018, Volos, Greece. https://hal.science/hal-02012647v1
2017
François Allal, Quoc Khanh Doan, Béatrice Chatain, Alain Vergnet, Gilles Breuil, et al.. Héritabilité de la résistance à la nécrose nerveuse virale de populations sauvages de Bar/Loup (Dicentrarchus labrax). Journées techniques du Sysaaf, Dec 2017, Rennes, France. https://hal.inrae.fr/hal-03156758v1
2017
François Allal, Ronan Griot, Pierre-Alexandre Gagnaire, Christophe Klopp, Aline Bajek, et al.. GENESEA : développement de la sélection génomique chez le bar et la daurade. Journées Techniques du Sysaaf, Dec 2017, Rennes, France. https://hal.inrae.fr/hal-03156734v1
2017
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. Sélectionner sur l’efficacité alimentaire : une nouvelle approche chez le bar. Journées Techniques du Sysaaf, Dec 2017, Rennes, France. https://hal.inrae.fr/hal-03156749v1
2017
Benjamin Geffroy, Marc Vandeputte. Projet FEAMP 3S : Seabass, sex and stress. Journées techniques du Sysaaaf, Dec 2017, Rennes, France. https://hal.inrae.fr/hal-03156715v1
2017
François Allal, Marc Vandeputte, Alain Vergnet, Frédéric Clota, Mathieu Besson, et al.. Efficacité d’une sélection pour la résistance au jeûne. Journées Techniques du Sysaaf, Dec 2017, Rennes, France. https://hal.inrae.fr/hal-03156744v1
2017
Quoc Khanh Doan, Marc Vandeputte, Béatrice Chatain, Pierrick Haffray, Alain Vergnet, et al.. Genetic variation of resistance to Viral Nervous Necrosis and genetic correlations with production traits in wild populations of the European sea bass (Dicentrarchus labrax). Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. https://hal.inrae.fr/hal-03156682v1
2017
François Allal, Sebastien Ferrari, Khaled Horri, Alain Vergnet, David Benhaïm, et al.. Heritability of boldness and hypoxia avoidance in European seabass, Dicentrarchus labrax. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. https://hal.inrae.fr/hal-03156670v1
2017
Marc Vandeputte, Mathieu Besson, François Allal, Florence Phocas, Edwige Quillet. Selective breeding to reduce the ecological footprint of aquaculture. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. . https://hal.inrae.fr/hal-03156701v1
2017
Marc Vandeputte, John Bostock. AQUAEXCEL2020 : an open European network of aquaculture research infrastructures. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. https://hal.inrae.fr/hal-03156690v1
2017
Mathieu Besson, Hans Komen, Gus Rose, Edwige Quillet, Johan A. M. van Arendonk, et al.. Using the right breeding objective can decrease environmental impacts and increase farm profit of sea cage farming with different quota restrictions. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. https://hal.inrae.fr/hal-03155415v1
2017
Mathieu Besson, François Allal, Béatrice Chatain, Alain Vergnet, Frédéric Clota, et al.. A medium-throughput method to phenotype fish for individual feed efficiency. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. . https://hal.inrae.fr/hal-03155407v1
2017
Marc Vandeputte. L'élevage piscicole (de précision). Communication à l'Académie d'Agriculture de France, Oct 2017, Paris, France. https://hal.inrae.fr/hal-03155401v1
2017
François Allal, Quoc Khanh Doan, Béatrice Chatain, Pierrick Haffray, Alain Vergnet, et al.. Genetic variation of resistance to Viral Nervous Necrosis in wild populations of the European sea bass (Dicentrarchus labrax). XVI Congreso nacional de Aquaculture, Oct 2017, Zaragoza, Spain. https://hal.inrae.fr/hal-03155395v1
2017
Marc Vandeputte. AQUAEXCEL and AQUAEXCEL2020: Research infrastructures projects for the benefit of European aquaculture. CRB Anim International seminar, May 2017, Paris, France. https://hal.inrae.fr/hal-03155388v1
2017
Marc Vandeputte, Clémence Fraslin, Jérôme Bugeon, François Allal, Antonio Puledda, et al.. Peut-on sélectionner sur le rendement de filet chez les poissons ? (et chez le bar en particulier). Journée du SFAMN (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2017, Montpellier, France. https://hal.inrae.fr/hal-03155369v1
2017
Mathieu Besson, Béatrice Chatain, Alain Vergnet, Frédéric Clota, Sebastien Ferrari, et al.. Sélectionner sur l’efficacité alimentaire : une nouvelle approche chez le bar. Journée du SFAMN, Mar 2017, Montpellier, France. https://hal.inrae.fr/hal-03155384v1
2017
François Allal, Pierrick Haffray, Marc Vandeputte. La sélection génomique chez les poissons marins, pour quoi faire ?. Journée du SFAMN (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2017, Montpellier, France. https://hal.inrae.fr/hal-03155373v1
2017
Marc Vandeputte. Selective breeding for better farmed fish: how to be more efficient ?. AQUAFARM, Jan 2017, Pordenone, Italy. https://hal.inrae.fr/hal-03155356v1
2016
Martin Prchal, Antti Kause, Anna K. Sonesson, Marc Vandeputte, Hana K. Kroupová, et al.. Estimation of genetic parameters of some quantitative traits in one-year common carp. Aquaculture Europe 2016, Sep 2016, Edinburgh, United Kingdom. . https://hal.inrae.fr/hal-03155316v1
2016
Christos Palaiokostas, Sophie Cariou, Anastasia Bestin, Jean-Sébastien Bruant, Pierrick Haffray, et al.. Investigation of genetic resistance to Viral Nervous Necrosis in European sea bass (Dicentrarchus labrax) using RAD sequencing. Aquaculture Europe 2016, Sep 2016, Edinburgh, United Kingdom. https://hal.inrae.fr/hal-03155244v1
2016
Sebastien Ferrari, Alain Vergnet, Frédéric Clota, Béatrice Chatain, François Allal, et al.. Mesurer l’efficacité alimentaire individuelle chez le bar ?. 5emes Journées Recherche Filière Piscicole, Jul 2016, Paris, France. . https://hal.inrae.fr/hal-03154832v1
2016
Marc Vandeputte, Béatrice Chatain, Pierrick Haffray, Edwige Quillet. La sélection génétique : un outil pour diminuer l’empreinte écologique de la pisciculture. 5emes Journées Recherche Filière Piscicole, Jul 2016, Paris, France. https://hal.inrae.fr/hal-03154837v1
2016
Anne-Sophie Tyran, Alexandre Desgranges, Anastasia Bestin, Florian Enez, François Allal, et al.. Résistance génétique à l'entérite chez la truite ? Interaction avec la flavobactériose et les caractères de production. 5. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2016, Paris, France. https://hal.inrae.fr/hal-02743196v1
2016
Dofungo Ouatarra, Anastasia Bestin, Pierrick Haffray, Florian Enez, Sophie Cariou, et al.. Utilisation d'imagerie et d'ultrasons pour l'amélioration du rendement en chair par sélection génétique de la daurade. 5. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2016, Paris, France. pp.30. https://hal.inrae.fr/hal-02741919v1
2015
Quoc Khanh Doan, Marc Vandeputte, Béatrice Chatain, Alain Vergnet, François Allal. Combining VITASSIGN and COLONY : an efficient practical procedure for parental assignment with missing parents. ISGA XII, Jun 2015, Santiago de Compostela, Spain. https://hal.science/hal-01535335v1
2015
Marc Vandeputte, Khaled Horri, François Allal, Sebastien Ferrari, Marie-Odile Vidal, et al.. Does early growth play a role in the sex determination of european seabass dicentrarchus labrax?. 12th International Symposium on Genetics in Aquaculture (ISGA), Jun 2015, Santiago de Compostela, Spain. pp.1. https://hal.inrae.fr/hal-02735070v1
2015
Pierrick Haffray, Ivonne Acosta Alba, Sophie Cariou, J.S. Bruant, Jérôme Bugeon, et al.. Can selective breeding for growth or fillet yield decrease environmental impact of fish farming? a gilthead sea bream (Sparus aurata) case study. 12. International Symposium on Genetics in Aquaculture, Jun 2015, Santiago de Compostela, Spain. https://hal.science/hal-01194132v1
2015
Jasmien Hillen, A. Carr, B. Hellemans, R. Ogden, John B. Taggart, et al.. Estimates of genetic variability and inbreeding in selected populations of European sea bass. 12. International Symposium on Genetics in Aquaculture, Jun 2015, Santiago de Compostela, Spain. https://hal.inrae.fr/hal-02735139v1
109 article(s)